Homologs in group_4600

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4600

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4600

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37342 0.0 783 71 0 511 1 yjjI Uncharacterized protein YjjI Escherichia coli (strain K12)
P44744 5.21e-110 339 38 5 459 1 HI_0521 Uncharacterized protein HI_0521 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12400
Feature type CDS
Gene -
Product YjjI family glycine radical enzyme
Location 2749359 - 2750900 (strand: 1)
Length 1542 (nucleotides) / 513 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4600
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF11230 Glycyl radical enzyme YjjI-like

Protein Sequence

MTEQSVIQRCQQIVENPTLSPEQKRHFLALEAENMLPYPTLSNEASLALNERVICDMYEGHAPYKPRYVLPDYAKFLAQGSRYLELEPAQDFDDALNMLTILYHHVPSVTSMPVYLGRIDKILLPYVGNLTQEQLYPKLKRFWRYLDRTLPDAFMHANIGPEDSIITRLILKVDVELQQVAPNLTFIYDAALTPSDLLHQAITNICHSSKPHIANGTLQDAVFGKDEYGIVSCYNSLPQSGGGSTLVRINLKEVAKRSQNSADFLENVLPFYMQKQIEIINARCEFLYEKSNFFQQSFLVEEGLLSPDRFAPMFGIYGMAEAVSLLLEKEGHTANYGHSEAANKLSYIISEKLAQFVAQTPVKYGWKQRAMLHAQSGISSDIGTTPATRIPYGTEPDPVTHLMTVAPHHQFYTSGISDILTVDETIKQNPDALMQLCLGAFSCGLREFTANVGGNDLVRVTGYMVRLSDLKKYKEEGSRLNTTWLGDEATTNCHIAERKPRVISHEQQMRFDK

Flanking regions ( +/- flanking 50bp)

GATAAATAAATCTTACATCTTTCTTTTGCTCTTGAGTTGCTGAGGTGGTTATGACTGAACAATCTGTTATCCAACGTTGTCAACAAATCGTAGAAAATCCAACCCTTTCCCCCGAACAAAAACGTCATTTTCTAGCATTAGAAGCGGAAAATATGTTGCCATACCCGACATTATCTAACGAGGCGAGCCTTGCGCTAAATGAACGGGTTATCTGCGATATGTATGAAGGTCATGCCCCTTATAAACCACGTTATGTATTACCTGATTACGCGAAATTCTTAGCACAAGGCTCGCGCTATTTAGAGCTTGAACCTGCCCAAGATTTTGATGATGCGCTAAATATGCTGACTATCCTTTATCATCATGTTCCTTCAGTCACTTCAATGCCGGTTTATTTAGGTCGTATTGATAAAATCTTACTACCTTATGTGGGGAATTTGACGCAAGAGCAACTCTATCCAAAATTAAAGCGTTTCTGGCGCTATCTTGATAGAACCCTTCCTGATGCCTTTATGCACGCTAATATTGGCCCTGAAGACTCTATCATTACACGTTTAATTCTTAAGGTAGATGTTGAACTTCAACAAGTAGCCCCGAATCTCACCTTTATTTATGACGCGGCACTAACACCTTCTGATTTATTGCACCAAGCAATCACCAATATTTGTCATAGTAGTAAACCCCATATTGCTAACGGTACATTGCAAGATGCTGTATTTGGTAAAGATGAATACGGTATTGTTAGTTGTTATAACTCTCTACCGCAAAGTGGTGGCGGTAGCACTTTAGTTCGTATCAATCTCAAAGAAGTAGCAAAGCGCAGCCAAAATAGTGCCGACTTTCTAGAGAATGTATTGCCGTTTTACATGCAAAAACAAATCGAGATCATCAATGCTCGTTGCGAATTCCTCTATGAAAAATCAAACTTTTTTCAACAAAGCTTTTTAGTAGAAGAAGGTTTGCTCTCACCCGATCGTTTTGCCCCGATGTTTGGCATTTATGGTATGGCTGAAGCAGTTTCTCTATTACTTGAAAAAGAAGGTCATACAGCAAACTATGGTCATAGCGAAGCGGCCAATAAACTTAGCTATATTATTAGTGAAAAACTGGCCCAATTTGTTGCACAGACCCCTGTAAAATATGGTTGGAAACAGCGTGCCATGTTACATGCTCAATCAGGCATAAGTTCTGATATTGGTACTACACCGGCGACCCGAATTCCTTATGGAACAGAGCCTGATCCTGTTACTCATTTAATGACCGTTGCCCCCCACCATCAATTTTATACTTCAGGTATTAGTGATATTTTAACCGTGGATGAAACTATCAAACAAAATCCTGATGCCTTAATGCAACTGTGCTTAGGGGCGTTTTCTTGCGGATTACGTGAATTTACCGCTAATGTGGGTGGCAATGATTTAGTCCGTGTCACTGGCTATATGGTGCGGTTATCGGATTTAAAAAAATATAAAGAAGAAGGCTCTCGCCTAAATACAACTTGGTTAGGAGATGAAGCAACAACCAATTGCCATATTGCTGAACGAAAACCACGAGTGATTAGCCATGAACAGCAGATGCGCTTCGATAAATAAAATACTGCCTTTTTCTTGTGTTGATGGCCCAGGCAATCGCCTCGCCATCT