Homologs in group_4583

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4583

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4583

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12205
Feature type CDS
Gene -
Product TraE/TraK family type IV conjugative transfer system protein
Location 2697610 - 2698236 (strand: -1)
Length 627 (nucleotides) / 208 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4583
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF05309 TraE protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12067 conjugal transfer pilus assembly protein TraE - -

Protein Sequence

MKFDVFLKSWQGTQLENRWQRFLIAVLVLSNLLLAVAAFSRNTVVAIQPPTLSETAEVSRNQATQPYLESWGLYLAELMGNVTPGNVSFIRVAIEPLLSPAVYQQVVDALEIQARQIREDRVTLKFQPRQVEYEYETGHVFVTGYSLVSGPSGDEQRQTRTYEFDIDIEQYRPKLSWMDTYEGQARTKRVREKLTQEQNRRVNDANQN

Flanking regions ( +/- flanking 50bp)

CCAACCAAAGCCAAGACAATCCCTAACCCATTTATCAGGAGCTATCTGCCGTGAAGTTCGACGTGTTTTTAAAATCATGGCAAGGCACGCAATTAGAGAACCGATGGCAACGGTTCCTGATTGCGGTGCTGGTGCTATCTAACTTGCTGCTTGCGGTAGCGGCATTTTCTCGCAATACCGTGGTGGCCATTCAACCACCAACCTTGTCTGAAACGGCTGAAGTGTCACGAAACCAGGCCACTCAGCCTTACCTGGAATCTTGGGGACTCTACCTGGCTGAGCTTATGGGCAACGTGACGCCGGGCAATGTGTCCTTTATCCGGGTTGCTATCGAGCCGCTACTTTCACCTGCGGTGTACCAGCAAGTGGTCGATGCACTGGAGATTCAGGCAAGACAGATCCGTGAAGACCGAGTCACGCTCAAATTCCAACCCAGACAAGTGGAGTATGAGTATGAAACCGGCCATGTCTTTGTGACCGGTTATTCCTTGGTCTCTGGACCATCTGGAGATGAGCAGCGCCAAACTCGCACCTATGAGTTTGATATCGATATTGAGCAATACCGTCCAAAACTTAGCTGGATGGATACGTATGAAGGGCAAGCTAGAACGAAGCGAGTTCGTGAAAAGTTGACCCAAGAGCAAAACCGGAGGGTGAATGATGCGAACCAAAATTAGTCGATGGATGACACCAAGCTTAATCGCAATTAGCTTGAGTGGCGTCCTGT