Homologs in group_4581

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4581

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4581

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P41067 4.15e-20 95 30 5 212 3 traB Protein TraB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12195
Feature type CDS
Gene -
Product TraB/VirB10 family protein
Location 2695438 - 2696727 (strand: -1)
Length 1290 (nucleotides) / 429 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4581
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF03743 Bacterial conjugation TrbI-like protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12065 conjugal transfer pilus assembly protein TraB - -

Protein Sequence

MKAQWEQMSPNMKRGLSVAGIAGGLILMVMVFSPNPDDGSSSRNRQETIRHILTDTNTRDVGVDSLAANVKLLSERNEQLRREVERLRRDVDSGRLSPGSPSIPSEVNAELARLRAELDDVRAGGDAAVEGTNSRFEVPLSAMELPKEERPLPSNPDDYFANAPLPDPLYQQPANGQGTRARDVPLPPITIRMIEPEVVAEPEVVVQEAPPLYLPAGSIISGTLITGLDAPTHESARREPFPALLRIQKEAILPNRFRADIKECFLIAAGYGDLSSERAYLRGETISCVREDGGVIETRLDSYAVGEDGKAGIRGRLVSKQGQLVAKSMMAGFLQGLAGAFDVNPVPTIQTGNAGDTQLYQQVMSQEALQGAAIKGTGKALDRVAKFYLDMAENMFPVIEVDAARKIEVIVTRGASLSLATSQGVGARR

Flanking regions ( +/- flanking 50bp)

GAAGCGGTGGAAAGTCAGCGACCTTCGCTTCTTGTGGGAGGTGAATAACGATGAAAGCACAATGGGAGCAAATGAGCCCGAACATGAAGCGGGGTCTATCGGTTGCTGGTATTGCTGGTGGTCTCATCCTTATGGTGATGGTGTTTTCACCTAATCCTGACGATGGCTCAAGCAGTCGTAACCGGCAGGAAACGATCCGGCACATTCTTACGGATACCAATACTCGTGATGTTGGGGTCGATAGTTTGGCTGCGAACGTAAAACTACTCAGTGAGCGCAATGAACAGTTACGTCGTGAAGTTGAGCGCTTGCGTCGTGACGTCGATTCAGGACGGCTAAGCCCAGGTTCGCCTTCTATACCAAGTGAGGTCAATGCGGAGTTGGCTCGCCTTCGAGCGGAACTTGATGATGTTCGCGCTGGAGGTGATGCAGCTGTTGAAGGCACAAATAGCCGTTTCGAAGTGCCTTTATCTGCCATGGAATTGCCTAAAGAAGAAAGGCCACTGCCGTCTAACCCAGACGACTATTTTGCCAATGCGCCGCTGCCTGATCCGCTCTATCAGCAGCCAGCCAATGGCCAAGGTACACGAGCACGAGATGTTCCATTGCCGCCAATCACGATTCGTATGATTGAGCCTGAAGTGGTTGCTGAACCAGAGGTTGTTGTGCAAGAAGCGCCGCCTTTGTATCTACCGGCGGGCAGCATCATCTCAGGTACTTTGATCACCGGTTTGGATGCACCTACTCACGAGTCCGCAAGACGTGAACCTTTTCCTGCATTGCTGAGGATTCAAAAGGAAGCCATTTTACCCAACCGATTTAGAGCGGATATCAAAGAGTGTTTCTTGATCGCCGCAGGTTACGGTGATTTGAGCTCTGAGCGTGCTTATTTGCGAGGCGAGACCATTTCATGTGTGAGAGAAGATGGTGGCGTCATTGAAACGCGACTGGATTCTTATGCCGTGGGTGAAGACGGCAAAGCCGGTATTCGTGGCCGATTAGTGTCGAAACAAGGCCAGCTGGTGGCCAAATCGATGATGGCCGGATTCCTTCAGGGCTTGGCTGGCGCATTTGATGTGAATCCTGTACCAACGATTCAGACGGGTAATGCCGGTGATACTCAGCTGTACCAGCAAGTCATGAGCCAAGAAGCATTACAAGGCGCTGCGATTAAAGGCACAGGTAAAGCATTGGATCGAGTGGCCAAGTTCTATTTGGACATGGCTGAAAATATGTTCCCAGTCATAGAGGTAGACGCTGCAAGGAAAATTGAAGTCATAGTCACTCGTGGGGCCTCGTTGTCGTTGGCCACTTCACAAGGTGTAGGTGCAAGAAGATGAAAAAATCCTGCATGTTGCTAACCGATCGAAGTCCGTTTCAGACAATAAGA