Homologs in group_4580

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4580

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4580

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12190
Feature type CDS
Gene traV
Product type IV conjugative transfer system lipoprotein TraV
Location 2694791 - 2695363 (strand: -1)
Length 573 (nucleotides) / 190 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4580
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF09676 Type IV conjugative transfer system lipoprotein (TraV)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12064 conjugal transfer pilus assembly protein TraV - -

Protein Sequence

MTTSMQNNPKHQSKQWSKAGLLLLAVGSTLLSGCSSLGLGSSEYGCPGMPDGVRCLSAREVYELTSNGAAPKTIDAVATRIGSPSGYSQSDLETGLLSHPALPETQQSAPIRIPSRVMRIWIAPWEDDRGDLNLSSYVFTEIEPRRWDIGVSAPRTVSPVLRPLQTQSDSASAGADGKRDNLSIYGETNE

Flanking regions ( +/- flanking 50bp)

ATCGAAGTCCGTTTCAGACAATAAGATGTGTATCCAGAGGAGAGTTAACCATGACGACATCAATGCAGAACAACCCAAAGCACCAGTCAAAACAGTGGTCTAAAGCTGGATTACTTTTATTGGCAGTCGGCTCAACCTTATTGTCTGGCTGTAGTTCATTGGGTCTTGGGAGTAGTGAATATGGATGCCCAGGTATGCCTGACGGTGTGCGCTGTTTATCCGCGCGTGAAGTCTATGAGCTTACCAGTAATGGCGCTGCACCCAAGACGATTGATGCTGTGGCGACTCGAATTGGTTCTCCCTCTGGGTATTCACAATCTGATTTAGAAACAGGACTGTTGAGCCATCCAGCATTACCTGAGACGCAGCAATCTGCACCTATTCGCATTCCTTCAAGGGTGATGCGAATTTGGATTGCGCCTTGGGAGGATGACCGTGGAGATCTGAATTTATCCAGCTACGTGTTTACCGAAATTGAACCGCGCCGGTGGGATATTGGGGTGTCAGCACCTCGAACGGTTTCGCCAGTGCTACGTCCACTTCAGACTCAAAGCGATTCTGCCTCAGCGGGAGCTGATGGTAAGCGCGATAACTTGAGTATCTACGGAGAAACTAACGAATGACAAATGCAGTTCGCACCATTCAAACTCAGCGCCTAATGACCATTGGTGCG