Homologs in group_4579

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4579

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4579

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12185
Feature type CDS
Gene traA
Product TraA family conjugative transfer protein
Location 2694408 - 2694794 (strand: -1)
Length 387 (nucleotides) / 128 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4579
Orthogroup size 1
N. genomes 1

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Genomic region

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12069 conjugal transfer pilus assembly protein TraA - -

Protein Sequence

MTNAVRTIQTQRLMTIGALGLMALMISEPSFAGTGGDAFTDVWDTLKDWTQGTLGRIVAGAMVLVGIVGGIARQSLMAFALGIGGGMGLYNTPTVVESVMSATLPVVASTQEVIGTTVPAISAVLLGT

Flanking regions ( +/- flanking 50bp)

GGAGCTGATGGTAAGCGCGATAACTTGAGTATCTACGGAGAAACTAACGAATGACAAATGCAGTTCGCACCATTCAAACTCAGCGCCTAATGACCATTGGTGCGCTTGGTTTAATGGCGTTAATGATTTCGGAGCCCTCATTTGCGGGCACCGGTGGTGATGCTTTCACCGATGTGTGGGATACCCTAAAAGACTGGACCCAAGGTACTTTGGGACGGATCGTAGCGGGAGCCATGGTACTGGTGGGTATTGTGGGCGGTATCGCTCGCCAAAGCTTGATGGCTTTTGCCTTGGGCATTGGTGGCGGTATGGGTCTCTACAATACGCCAACAGTCGTTGAAAGTGTTATGTCTGCAACTTTACCTGTTGTTGCCAGCACTCAAGAAGTCATTGGCACAACAGTTCCAGCAATCAGCGCCGTCTTACTGGGCACCTGAATGTGAACCACAGTAGGCAGTTCACTTAAGGTAATCAAACTAGGTCTACA