Homologs in group_4574

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4574

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4574

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P18472 7.69e-13 70 28 6 198 3 traW Protein TraW Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12150
Feature type CDS
Gene -
Product TrbC family F-type conjugative pilus assembly protein
Location 2687272 - 2688399 (strand: -1)
Length 1128 (nucleotides) / 375 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4574
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF09673 Type-F conjugative transfer system pilin assembly protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12061 conjugal transfer pilus assembly protein TraW - -

Protein Sequence

MMRRPCLLFLLVAPLAWVQVSWAQEPYPLSDEDKKIVEMSRSILQSAVDGSSEFIEPFSPIEQPASLKHNDEWLIFASSSLGDSSLKQLFKEASATGAIVLFRGIPEGKTLGAAIRDWHTLMVGLDPVPQVRIDPKAFVHWRVTSVPAIFRIEDDKVTASALGVYSKDWLQRQIETGNTGSLGQRGPIHSILEPDLMQVAMQRLQSLDLGALKKKAIERFWSRQTFTDLPKATQYRIRTVDPTIVMQRPLLDANGRTLIPAGTRINPLKALPFTQQLVVFNASNAEEVDAVAHWLETQDRTLRRITLITTQLDRTQGWNSLNALEKTLDSPVYLLNASLKQRFDLQVTPSFVQAKGLAFEIEEIPAKELVHEKAQ

Flanking regions ( +/- flanking 50bp)

TAAGCGCGAGCAGATTGTTGGTCGCGCTTGGCCGCTTTGGTAGGAGGTGGATGATGAGAAGACCATGCCTCTTATTTTTGTTGGTTGCTCCATTGGCTTGGGTTCAAGTGTCCTGGGCACAAGAGCCTTATCCGTTGTCTGACGAGGACAAAAAGATCGTTGAAATGAGCCGCAGCATTTTACAAAGTGCTGTGGATGGTTCATCTGAATTTATCGAGCCTTTTTCACCGATTGAACAACCTGCGTCGCTCAAACACAACGATGAATGGTTGATTTTTGCGTCGTCTTCACTGGGGGATTCCTCACTGAAGCAGCTATTTAAAGAGGCCAGTGCAACCGGCGCTATTGTGTTGTTTCGGGGAATTCCTGAAGGAAAGACCTTGGGGGCGGCTATCCGTGATTGGCATACGCTGATGGTGGGACTTGATCCTGTTCCTCAGGTTCGAATCGATCCGAAAGCCTTTGTGCACTGGCGGGTGACTAGCGTGCCTGCCATTTTCCGCATAGAAGATGACAAGGTGACTGCAAGTGCACTAGGGGTTTACAGCAAGGACTGGTTGCAGCGTCAAATTGAAACAGGCAATACCGGTTCATTGGGTCAACGCGGTCCGATTCATTCCATTTTAGAACCGGATTTGATGCAAGTGGCGATGCAGCGTTTACAGTCGCTTGACCTGGGCGCGTTAAAGAAAAAAGCCATTGAGCGATTCTGGTCTCGCCAAACTTTCACTGACTTACCCAAAGCCACGCAGTATCGGATAAGAACGGTTGATCCAACCATCGTCATGCAGCGGCCACTATTGGATGCCAATGGCCGAACATTGATCCCAGCAGGAACGCGTATTAACCCGCTAAAAGCCTTGCCGTTTACTCAGCAGCTTGTGGTGTTTAATGCGTCGAACGCTGAAGAAGTGGACGCAGTTGCGCATTGGCTTGAGACGCAAGATAGGACACTGCGCCGCATTACGCTTATCACCACGCAGCTCGACCGTACTCAAGGTTGGAATAGCCTAAATGCGCTCGAAAAGACATTGGATAGTCCGGTTTACCTTCTCAATGCCTCGCTAAAGCAGCGCTTTGATTTGCAAGTCACCCCATCGTTTGTTCAAGCAAAGGGGCTCGCGTTTGAAATAGAAGAAATTCCAGCAAAGGAGCTTGTTCATGAAAAAGCTCAATAATACGTATCGTCTGATGCGGACTCTCGTTGTCATGCTTGTCCTGGGCGCAT