Homologs in group_4572

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4572

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4572

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24082 2.89e-12 74 33 1 107 1 traN Mating pair stabilization protein TraN Escherichia coli (strain K12)
P24082 1.21e-05 53 28 3 135 1 traN Mating pair stabilization protein TraN Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12140
Feature type CDS
Gene traN
Product conjugal transfer protein TraN
Location 2682565 - 2686257 (strand: -1)
Length 3693 (nucleotides) / 1230 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4572
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF06986 F-type Type IV secretion system, TraN

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12058 conjugal transfer mating pair stabilization protein TraN - -

Protein Sequence

MKPTLFTRVLAGVLSITMACLPLHGVAADVQRQSGLSGQQEGKQLLQNWTMPALNGNTLSVPNGSGNESINLQELFPGMDQGSLDVLTGVYGSDASMNQLGTQRQESMASESGATGEAFRSLQQIKDRSRPDMVNDPLWALTDAVQTDPNLLTQSFPGCESQGEGSPNYQQCDRLNTAVNSCTITHDYTAGIIEHVSGPMNLRSCGEGCLEVWIGRIGDNYWSGRCKVFEQAITLKVVNPDAITSAVLEYAKWDDYMQVWLGDQKVWSGPNNNFPPETAGRCELSTSWERNPNTDLTARLKAVEPGLEVPVKIRVSVTGSGEGYARIKVRFDPTKVVMNDSWSPQSCIEQAADIPAKFSDYSIQCTDQPSSTNGCTVVNGVSVCESYFAPSPVAGISPLCRRVQVSVDDESYKGIENQACQVLEANPSCGFMSSECAETNDKGECIRFTDTYDCGLQTSDPKCVVSNLMPSSFEACEPTQTITPFTETKHVPDYQVCEKISTLTQCQLERRVSAETHQQSWSIERGCFSSEIISFVPQHSTTMQTGNATLRIFDNQNTEIKITESPSKANGWKTTLSLKGNKETVTETKPSIKYPEMTCPKGTLVGSLCKVVNGSIISWHEPQEVTRSKCESGWNKVDFDTCSREVQKCLAPGKLSASLAFSGKYLEQDVVHQSSDPGIDQCLMQTDQFTAVQWRCLDTGTKRIDGLTVGSGELANLGSLYPAVVSSPAHLTSRGSSDGLGLSCWRARATYNASTSHPEFNMGSSDSWVDANGNTQTIVNNGQNTTTNTCAALEQNPACQYVRTECTEGGAGHEGFCYIQSLVYDCGQSVEVQNARMETQYNCEGPVRCMGTDCLEPESIKQANFAEAAAMLNAAQFMTNDMSCTGADGQDNVECTVFKGNAGQCKKAVGGIVDCCEKPSGVSLSDYITMIVAVNKLDTAVMAMNPSSAIYGSWNTLREPITSTWSAVKEPFVSAWDSLMGAGPSTAAGAGAEQAATGFMQVLTNKTAEWVGTTFGSGAQSALFSNVGGAVGADGVVSGGNFALGGAAGAVLSTVMTAYMIYSVTMILIQLIWKCEQSEFEMNAKRVLKSCHYVGSYCKSKFLGACVEKRQSYCCFTSPLSRIIQEQVRPQLGLGWGSAKSPNCEGLTASQLNQVDWSQVNLDEWIGILSITGNLPEVPSLDLERLTGSGSTLNVDGNRQSAADRAIERLNGMDAQKLRQEATEEISGNN

Flanking regions ( +/- flanking 50bp)

CTCTACATTTTGTGGCGCTGGCAAGACTGCTGTAACTCGGGAGGTTAAATATGAAACCAACACTTTTTACCCGAGTTTTAGCGGGTGTTTTATCAATCACTATGGCGTGCTTGCCCTTACATGGTGTGGCCGCTGATGTACAGCGCCAATCCGGCCTAAGCGGACAACAAGAAGGTAAGCAATTGCTGCAAAACTGGACGATGCCCGCACTCAATGGCAATACATTGTCGGTGCCGAATGGCAGTGGTAATGAGTCCATTAACTTGCAAGAGCTTTTCCCTGGTATGGATCAGGGCTCATTGGATGTCTTAACGGGCGTTTATGGCTCTGATGCCAGCATGAATCAATTGGGGACACAGCGCCAAGAGAGCATGGCATCCGAAAGTGGCGCTACGGGTGAAGCATTTCGTTCGCTACAGCAAATCAAAGACAGGTCTCGGCCAGATATGGTCAATGATCCGCTTTGGGCATTAACTGATGCGGTTCAAACTGACCCAAATCTATTAACACAAAGCTTCCCAGGCTGTGAGTCTCAAGGTGAAGGTAGCCCAAATTACCAGCAATGCGACAGGCTCAATACAGCGGTTAACAGCTGCACTATTACTCACGATTACACGGCAGGCATTATTGAGCATGTTTCAGGACCAATGAACCTTCGCTCTTGTGGTGAGGGATGTCTTGAAGTTTGGATTGGACGAATTGGCGACAACTACTGGAGTGGCCGTTGTAAAGTGTTTGAACAGGCCATCACACTCAAAGTAGTGAACCCCGATGCGATTACCTCAGCCGTTCTTGAGTACGCCAAATGGGATGACTACATGCAAGTGTGGCTTGGCGATCAGAAAGTCTGGTCTGGGCCGAACAATAACTTTCCACCAGAAACGGCAGGTCGCTGCGAGCTCAGTACCAGTTGGGAGCGCAATCCAAATACCGATCTCACTGCCAGGCTAAAAGCGGTAGAACCCGGTTTAGAAGTGCCGGTAAAAATTCGCGTATCGGTTACGGGTAGTGGTGAGGGGTATGCACGCATCAAGGTGCGCTTTGATCCAACCAAGGTGGTGATGAATGATAGTTGGTCACCACAGTCCTGTATCGAACAAGCCGCGGATATCCCGGCGAAGTTTTCAGACTACAGTATTCAATGCACGGATCAGCCGTCTTCAACCAACGGATGTACGGTGGTCAATGGTGTTTCAGTTTGTGAATCCTACTTTGCCCCAAGCCCAGTGGCTGGCATATCGCCTTTGTGTCGGCGTGTTCAAGTGAGTGTGGATGATGAAAGCTATAAGGGGATTGAAAACCAGGCCTGCCAAGTGCTTGAAGCGAATCCTTCCTGTGGATTCATGTCGTCAGAATGTGCCGAGACCAATGATAAAGGTGAATGCATTCGTTTTACCGATACCTATGACTGTGGATTGCAAACCAGCGATCCAAAGTGTGTGGTATCCAACCTTATGCCAAGTAGTTTTGAGGCCTGTGAGCCTACCCAGACGATTACGCCATTTACTGAAACCAAGCATGTACCGGATTACCAGGTGTGCGAGAAGATCAGCACGCTTACTCAGTGTCAGTTAGAGCGACGTGTATCCGCTGAAACCCATCAACAAAGCTGGTCCATTGAGCGTGGTTGCTTTAGCTCTGAAATCATCAGTTTTGTTCCACAGCACAGCACCACCATGCAAACTGGAAACGCGACACTGAGGATTTTTGATAATCAAAATACTGAGATAAAAATCACTGAGTCGCCATCTAAGGCAAATGGTTGGAAAACGACACTCTCTCTTAAGGGCAACAAGGAGACGGTCACAGAGACGAAACCGTCCATTAAATACCCTGAAATGACCTGTCCAAAAGGAACCTTGGTTGGCTCATTGTGCAAGGTCGTTAATGGGTCGATTATTTCGTGGCATGAACCGCAGGAAGTCACGCGTTCCAAATGTGAGTCCGGCTGGAACAAAGTCGATTTCGATACTTGCAGCCGAGAAGTTCAGAAGTGTTTGGCTCCTGGGAAACTGAGCGCTTCATTGGCCTTCTCTGGCAAATACTTAGAGCAAGACGTTGTTCATCAATCAAGTGATCCGGGCATAGACCAATGCTTGATGCAAACGGATCAGTTTACTGCGGTTCAGTGGCGGTGTTTGGATACGGGCACAAAACGAATCGACGGGTTAACGGTTGGTAGTGGCGAGTTGGCCAATCTGGGAAGCCTTTATCCGGCGGTTGTTTCGTCTCCTGCTCATTTAACCAGTCGCGGCAGTTCTGATGGACTGGGGCTCTCATGCTGGAGGGCAAGAGCGACCTACAATGCTTCGACTTCTCATCCAGAGTTCAACATGGGCAGCTCAGATAGCTGGGTAGATGCCAATGGTAATACTCAAACCATCGTCAATAACGGACAAAACACGACCACCAATACGTGTGCCGCGCTGGAGCAAAACCCGGCCTGCCAGTATGTCAGAACCGAATGCACTGAAGGCGGGGCTGGTCATGAAGGCTTCTGCTATATCCAAAGTTTGGTGTATGACTGCGGACAAAGCGTTGAAGTGCAAAATGCACGAATGGAAACTCAATACAACTGTGAGGGGCCAGTTCGCTGCATGGGCACAGATTGTTTAGAGCCAGAGTCAATCAAGCAGGCTAACTTTGCAGAAGCCGCAGCTATGCTTAATGCGGCGCAGTTTATGACCAATGATATGTCATGCACGGGAGCTGATGGCCAAGACAACGTCGAGTGTACGGTCTTTAAAGGTAATGCTGGCCAGTGCAAAAAAGCCGTTGGCGGCATAGTGGATTGCTGTGAAAAGCCAAGTGGCGTGTCGCTATCGGACTACATCACGATGATAGTGGCGGTCAACAAGCTTGATACGGCAGTCATGGCCATGAATCCGTCTTCGGCAATCTATGGTTCCTGGAATACGCTCAGGGAACCAATCACCAGTACCTGGAGTGCGGTCAAAGAGCCCTTTGTGTCTGCATGGGACTCTCTCATGGGGGCTGGGCCATCAACGGCTGCTGGCGCGGGAGCAGAGCAAGCAGCGACAGGCTTCATGCAGGTGTTGACCAACAAAACGGCTGAATGGGTAGGTACGACCTTTGGTTCGGGGGCACAATCGGCTCTGTTTAGTAACGTTGGTGGCGCGGTTGGAGCCGATGGTGTCGTTTCGGGTGGTAACTTTGCGCTGGGTGGCGCTGCGGGCGCGGTTCTGAGTACGGTTATGACGGCCTACATGATTTATTCAGTCACCATGATCCTCATTCAGCTTATCTGGAAATGTGAGCAGAGTGAGTTTGAGATGAACGCTAAGCGGGTATTGAAGAGTTGCCACTACGTAGGCTCTTACTGCAAGTCTAAGTTCTTAGGTGCCTGTGTTGAGAAACGGCAATCATATTGCTGCTTTACTTCGCCGCTTTCACGGATTATTCAAGAACAAGTACGTCCTCAATTGGGCCTTGGTTGGGGCAGTGCCAAGTCACCAAACTGTGAAGGTTTGACCGCGAGTCAGTTAAACCAGGTAGATTGGAGCCAAGTCAATCTGGATGAATGGATAGGTATTTTGTCGATCACGGGCAACCTACCTGAAGTGCCGTCACTGGATCTGGAACGACTCACCGGCTCAGGAAGCACGCTAAACGTTGATGGAAATCGTCAGAGTGCCGCAGACAGGGCCATTGAACGGCTAAACGGCATGGATGCCCAGAAACTGCGTCAGGAGGCGACGGAAGAAATTTCTGGAAATAATTGAGCGCACTCTTAGAACAGAAGGCTTTGTGATGCAAAGCCTTCTATATCGAT