Homologs in group_4565

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4565

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4565

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45907 1.98e-05 49 27 6 178 4 yqaJ Uncharacterized protein YqaJ Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12095
Feature type CDS
Gene -
Product YqaJ viral recombinase family protein
Location 2674473 - 2675489 (strand: -1)
Length 1017 (nucleotides) / 338 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4565
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF09588 YqaJ-like viral recombinase domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5377 Mobilome: prophages, transposons (X) X Phage-related protein, predicted endonuclease

Protein Sequence

MKVIDLSQRTPAWHQWRIAGVTASEAPIIMGRSPYKTPWRLWAEKTGFVLPEDLSNNPNVLRGIRLEPQARRAFENAHNDFLLPLCAEADHNAIFRASFDGINDAGEPVELKCPCQSVFEDVQAHREQSEAYQLYWVQVQHQIQVANSTRGWLVFYFEDQLIEFEIQRDAAFLTELQETALQFWELVQTKREPSKCPEQDCFVPKGEAQYRWTSLSRQYCSAHAEVVRLESHIKSLKEEMREAQSKLVAMMGNYAHADYAGVKLSRYMMAGTVDYKQLATDKLGELDEQVLAAYRKAPQERLRISTNKPDQPVETPIKISLEQENLVLPGDSPSSFYF

Flanking regions ( +/- flanking 50bp)

CTGAAGGGGAGTTCTCTCCTTCGGGGGAGTCTCCCCTCAAAGGAGGCAATATGAAGGTTATCGACCTATCACAGCGTACTCCTGCATGGCACCAGTGGCGCATTGCAGGGGTTACGGCATCTGAAGCCCCAATTATTATGGGGCGTTCTCCCTACAAAACACCTTGGCGATTATGGGCAGAAAAAACCGGATTCGTATTACCGGAAGACCTGTCGAATAATCCTAATGTGCTTCGCGGTATTCGGTTGGAGCCTCAAGCAAGGCGAGCATTTGAGAATGCGCATAATGACTTTCTTCTGCCGTTATGTGCAGAAGCCGATCATAACGCAATCTTTCGAGCCAGCTTTGATGGCATCAACGATGCGGGCGAACCCGTTGAACTGAAATGTCCTTGCCAGTCAGTTTTTGAGGATGTGCAAGCTCACAGAGAACAAAGCGAGGCGTACCAGTTGTATTGGGTGCAGGTACAGCATCAAATACAGGTCGCCAATAGCACGCGTGGTTGGTTAGTTTTCTATTTTGAGGATCAACTGATTGAGTTTGAAATACAACGAGACGCGGCGTTCTTAACTGAATTGCAAGAAACGGCGCTTCAGTTTTGGGAGTTAGTTCAAACCAAAAGAGAACCGTCAAAATGCCCTGAGCAAGATTGTTTTGTTCCCAAGGGTGAAGCCCAATACCGCTGGACATCGCTGTCTCGGCAATATTGCTCAGCACATGCCGAGGTGGTTCGACTGGAAAGTCACATCAAATCTTTGAAAGAAGAAATGCGAGAAGCTCAGTCAAAATTGGTCGCCATGATGGGTAACTACGCTCATGCCGACTATGCTGGGGTCAAACTCAGCCGCTACATGATGGCGGGTACGGTGGACTATAAGCAATTGGCCACCGATAAATTAGGCGAGCTGGACGAACAGGTTTTAGCAGCCTACCGAAAAGCGCCACAAGAGCGGTTGCGCATCAGCACCAATAAGCCAGATCAGCCCGTTGAAACACCAATCAAAATTAGCCTTGAGCAAGAGAACTTGGTTCTGCCAGGTGACTCGCCGAGCTCATTTTATTTTTAACGTTCACTTGGAGCCGATTTCGGCTCCTTTCTAATGCGCTTACATCGAGT