Homologs in group_3898

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS09715 PMI_RS09715 30.4 Proteus mirabilis HI4320 - ogr/Delta-like zinc finger family protein

Distribution of the homologs in the orthogroup group_3898

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3898

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11880
Feature type CDS
Gene -
Product ogr/Delta-like zinc finger family protein
Location 2623819 - 2624079 (strand: 1)
Length 261 (nucleotides) / 86 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3898
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF04606 Ogr/Delta-like zinc finger

Protein Sequence

MRVLTIYCPECGEKAMIKKSNRKHKELTDLYCACRDPLCGHTFVLNLTFSHTLSPSAKKQDALLLAMIKNLSPQQREKALTLLQEI

Flanking regions ( +/- flanking 50bp)

TTAGGCTAATATAGAAGGTGGTGATAGATTGATAATAAAGAGAAAATACCATGCGTGTTTTAACAATTTACTGTCCTGAATGTGGTGAAAAAGCGATGATAAAGAAAAGTAATCGCAAGCATAAAGAGTTAACAGATCTTTACTGTGCCTGCCGTGATCCGCTTTGTGGGCATACCTTTGTGCTAAATCTTACCTTTAGTCATACTCTAAGTCCCAGCGCCAAAAAACAAGATGCCCTTTTATTAGCAATGATAAAAAATCTCTCGCCACAGCAACGAGAAAAAGCCTTAACCTTGTTACAAGAGATATAACGCTTTTTTACTTACTCTATTTTGCCTTGATTTTATGATCCTGCTCCCAT