Homologs in group_4545

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4545

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4545

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O69717 4.04e-18 78 33 2 119 4 vapB50 Putative antitoxin VapB50 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P64988 8.79e-14 66 40 1 87 4 BQ2027_MB2337 Uncharacterized protein Mb2337 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WLC3 8.79e-14 66 40 1 87 4 Rv2310 Uncharacterized protein Rv2310 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WLC2 8.79e-14 66 40 1 87 4 MT2372 Uncharacterized protein MT2372 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11500
Feature type CDS
Gene -
Product helix-turn-helix domain-containing protein
Location 2533734 - 2534186 (strand: 1)
Length 453 (nucleotides) / 150 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4545
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF12728 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1342 General function prediction only (R) R Predicted DNA-binding protein, UPF0251 family

Protein Sequence

MNTISERLSAEDIALAKLSSQELSAVMDINGKTQKLSIIDKTGNNHIVQIPNSALRLMIEILTQLGQGNTVSITPIHAELTTQEAADILNMSRPTFVKLLDTRAIPYSRKGNRRKVAYADIVAYKNELEQKRLDALAELSQLDQEMDMGY

Flanking regions ( +/- flanking 50bp)

ATTTTTCGAATATTTCAGATAATCTAGTTATTAAAAAGGGGGAAATACTAATGAATACGATAAGTGAGAGACTTAGTGCTGAAGATATTGCATTAGCAAAATTAAGTAGCCAAGAGCTATCCGCTGTTATGGATATTAATGGCAAAACGCAGAAGCTATCCATTATAGATAAGACGGGTAATAATCATATTGTACAAATACCAAATAGTGCATTACGCCTAATGATTGAAATTCTTACTCAACTAGGGCAAGGGAATACTGTTAGTATCACACCAATCCATGCTGAGCTAACGACACAGGAAGCGGCTGATATACTCAATATGTCCCGTCCTACATTTGTAAAATTATTAGATACACGAGCGATACCCTACTCTAGAAAAGGAAATCGTAGGAAAGTTGCTTATGCTGATATTGTTGCTTATAAAAATGAATTGGAGCAAAAACGACTTGATGCCCTTGCTGAATTATCGCAATTAGATCAAGAAATGGATATGGGGTATTAATGACAAACTATACTGTTTTGCTTGATGCCTGTGTCATGTATCCAGCCCCT