Homologs in group_4532

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4532

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4532

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B1JJ01 5.49e-140 398 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
B2K682 5.49e-140 398 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FHE3 5.49e-140 398 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B1LR41 1.59e-139 397 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain SMS-3-5 / SECEC)
Q669X6 1.81e-139 396 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TLE6 1.81e-139 396 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pestis (strain Pestoides F)
Q1CIE6 1.81e-139 396 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pestis bv. Antiqua (strain Nepal516)
A9R0C4 1.81e-139 396 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pestis bv. Antiqua (strain Angola)
Q8ZFH8 1.81e-139 396 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pestis
Q1C713 1.81e-139 396 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia pestis bv. Antiqua (strain Antiqua)
Q1R7G9 3.57e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain UTI89 / UPEC)
B7N775 3.57e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q8FE97 3.57e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TDY9 3.57e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7MZE3 3.57e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O81 (strain ED1a)
B7NVY9 3.57e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7MM49 3.57e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O45:K1 (strain S88 / ExPEC)
A7ZQV1 3.69e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O139:H28 (strain E24377A / ETEC)
Q3YY15 4.64e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Shigella sonnei (strain Ss046)
B6I6W8 5.53e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain SE11)
B7LF20 5.53e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain 55989 / EAEC)
C5BFL5 8.86e-139 395 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Edwardsiella ictaluri (strain 93-146)
Q46938 1.2e-138 394 65 1 278 1 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain K12)
B1IU01 1.2e-138 394 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A3X7 1.2e-138 394 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O9:H4 (strain HS)
B1XED7 1.2e-138 394 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain K12 / DH10B)
C5A0C6 1.2e-138 394 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli (strain K12 / MC4100 / BW2952)
Q0T121 1.65e-138 394 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Shigella flexneri serotype 5b (strain 8401)
B7LY99 3.44e-138 393 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O8 (strain IAI1)
Q31XE5 4.94e-138 393 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Shigella boydii serotype 4 (strain Sb227)
B7UHR2 5.83e-138 392 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B2T4U5 7.02e-138 392 65 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
Q83QB2 7.17e-138 392 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Shigella flexneri
B5Z4G1 8.45e-138 392 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X6I8 8.45e-138 392 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Escherichia coli O157:H7
C4LDM6 3.32e-137 390 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
Q8Z3Z9 2.55e-136 389 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella typhi
B5F4W4 2.55e-136 389 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella agona (strain SL483)
Q8ZM98 4.17e-136 388 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q05529 1.23e-135 387 65 1 278 1 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Dickeya dadantii (strain 3937)
B5BFI4 1.58e-135 386 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella paratyphi A (strain AKU_12601)
Q5PEP3 1.58e-135 386 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TUN8 2.54e-135 386 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella schwarzengrund (strain CVM19633)
B4T512 2.54e-135 386 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella newport (strain SL254)
B5RDZ4 2.54e-135 386 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QWV0 2.54e-135 386 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella enteritidis PT4 (strain P125109)
B5FUC8 2.54e-135 386 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella dublin (strain CT_02021853)
A1JMF5 2.99e-135 385 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B4EH54 3.56e-135 385 67 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
B4TGS4 4.24e-135 385 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella heidelberg (strain SL476)
A4WE30 5.4e-135 385 64 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Enterobacter sp. (strain 638)
C0PXK7 7.5e-135 385 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella paratyphi C (strain RKS4594)
A9N3I7 7.5e-135 385 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q57K99 7.5e-135 385 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Salmonella choleraesuis (strain SC-B67)
A7MPJ5 3.69e-133 380 63 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Cronobacter sakazakii (strain ATCC BAA-894)
B2TYP7 2.87e-132 378 64 3 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q9XB53 1.26e-125 361 59 1 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Pectobacterium carotovorum subsp. carotovorum
B9MNC2 2.23e-120 348 56 0 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / KCTC 15123 / Z-1320)
A9KNI2 1.04e-119 346 57 0 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
Q9KAX0 1.08e-118 343 56 0 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q5WJC2 4.71e-115 334 54 0 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Shouchella clausii (strain KSM-K16)
C4Z0J8 2.51e-113 330 54 1 280 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Lachnospira eligens (strain ATCC 27750 / DSM 3376 / VPI C15-48 / C15-B4)
Q838L9 3.27e-113 330 55 0 276 1 kduI1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1 Enterococcus faecalis (strain ATCC 700802 / V583)
Q832G5 5.68e-112 327 56 0 260 3 kduI2 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 2 Enterococcus faecalis (strain ATCC 700802 / V583)
T2KN98 5.97e-108 317 52 0 275 2 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1)
Q034I2 7.52e-108 317 53 1 277 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Lacticaseibacillus paracasei (strain ATCC 334 / BCRC 17002 / CCUG 31169 / CIP 107868 / KCTC 3260 / NRRL B-441)
A8FI32 9.5e-108 316 52 1 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Bacillus pumilus (strain SAFR-032)
B3WB42 2.65e-105 310 52 1 277 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Lacticaseibacillus casei (strain BL23)
Q8EMM9 1.71e-103 305 50 1 277 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q930T2 6.17e-103 304 51 0 276 3 kduI1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1 Rhizobium meliloti (strain 1021)
Q65E69 3.3e-102 302 51 1 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
Q92V09 1.13e-100 298 51 1 274 3 kduI2 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 2 Rhizobium meliloti (strain 1021)
P50843 3.27e-100 297 48 1 276 2 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Bacillus subtilis (strain 168)
A4WV81 1.2e-98 293 50 1 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
B9KKM8 1.16e-97 290 49 1 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Cereibacter sphaeroides (strain KD131 / KCTC 12085)
Q3J0N0 1.16e-97 290 49 1 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
A3PLM1 1.16e-97 290 49 1 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)
Q03U25 1.02e-96 288 48 2 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Levilactobacillus brevis (strain ATCC 367 / BCRC 12310 / CIP 105137 / JCM 1170 / LMG 11437 / NCIMB 947 / NCTC 947)
Q8A2S4 6.31e-94 281 48 0 275 3 kduI1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1 Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
B1ZP50 1.4e-92 277 50 4 265 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1)
Q5LJ16 3.34e-92 276 47 0 275 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2)
Q650K4 4.2e-92 276 47 0 275 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Bacteroides fragilis (strain YCH46)
Q8UB75 1.73e-91 275 46 1 276 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Agrobacterium fabrum (strain C58 / ATCC 33970)
A6W4E9 3.58e-89 269 44 1 279 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)
B8H5V5 8.97e-84 255 46 4 273 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Caulobacter vibrioides (strain NA1000 / CB15N)
Q9A873 8.97e-84 255 46 4 273 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q8A0B5 1.89e-83 255 44 2 275 3 kduI2 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 2 Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Q8PR01 3.56e-81 249 42 3 274 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Xanthomonas axonopodis pv. citri (strain 306)
Q3BZD0 3.9e-80 246 41 3 274 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Xanthomonas euvesicatoria pv. vesicatoria (strain 85-10)
Q8PE32 2.7e-79 244 41 3 274 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
B0RLD0 2.7e-79 244 41 3 274 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Xanthomonas campestris pv. campestris (strain B100)
Q4V0C6 2.7e-79 244 41 3 274 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Xanthomonas campestris pv. campestris (strain 8004)
B4RGF4 4.79e-78 241 42 3 278 3 kduI 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Phenylobacterium zucineum (strain HLK1)
A5YBJ4 0.000124 46 24 8 213 3 iolB 5-deoxy-glucuronate isomerase Lacticaseibacillus casei

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10510
Feature type CDS
Gene kduI
Product 5-dehydro-4-deoxy-D-glucuronate isomerase
Location 2312852 - 2313682 (strand: -1)
Length 831 (nucleotides) / 276 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4532
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04962 KduI/IolB family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3717 Carbohydrate transport and metabolism (G) G 5-keto 4-deoxyuronate isomerase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01815 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] Pentose and glucuronate interconversions
Metabolic pathways		 -

Protein Sequence

MEIRQPIHSEHAKRLDTEGLRKEFLIENLFCEGEMNLTYSHIDRIIVGGVVPTTQPLALMAGKALGVDFFLERRELGAINIGGAGKVIIDGEVFEIGPREAIYIGMGAKSVEFTSDSVETPARFYINCAPAHHTYPTRKITQQQASPEKLGNAENCNVRTIYKFLHPSVLPTCQLSMGMTVLEPGSLWNTMPCHTHERRMEVYLYFDMKDDNVVFHYMGEPTETRHLVVRNEQAVISPSWSIHSGVGSASYTFIWGMVGENQVFHDMDHVAMKDLK

Flanking regions ( +/- flanking 50bp)

ATGCATAACCTTTTCGTTATGCTCCCATCAGTAAAAATGAGGTATTTATAATGGAAATTCGTCAGCCAATTCATAGTGAACATGCTAAAAGGCTTGATACAGAAGGACTTCGTAAAGAGTTCCTGATTGAGAACCTATTCTGTGAAGGGGAAATGAATCTCACTTATAGCCATATAGATCGGATTATTGTTGGGGGAGTTGTCCCAACAACTCAACCTTTAGCATTAATGGCGGGTAAAGCACTTGGTGTTGATTTCTTCTTAGAAAGACGTGAATTAGGGGCTATTAATATTGGTGGTGCGGGTAAAGTTATTATAGACGGTGAGGTATTTGAAATTGGCCCTCGTGAAGCCATTTATATTGGTATGGGAGCCAAATCTGTTGAATTCACCAGTGATTCTGTAGAGACACCGGCGCGTTTTTATATTAACTGTGCACCAGCACATCACACTTATCCTACTCGCAAAATTACTCAACAGCAGGCCTCACCTGAAAAGTTAGGTAATGCAGAAAATTGTAACGTTCGTACGATTTATAAGTTTTTACATCCTTCAGTGTTACCAACATGTCAATTATCCATGGGGATGACAGTGCTTGAGCCGGGTAGCTTGTGGAACACAATGCCATGTCATACTCATGAACGTCGTATGGAAGTATATCTTTATTTCGATATGAAAGATGACAATGTGGTTTTCCATTATATGGGAGAGCCAACTGAAACTCGTCATTTAGTGGTACGCAACGAACAAGCTGTCATTAGTCCTAGTTGGTCAATTCATTCTGGCGTAGGAAGCGCATCTTATACCTTTATTTGGGGAATGGTGGGTGAAAACCAGGTATTCCACGATATGGATCATGTTGCTATGAAAGATCTGAAATAACAGATAATTAATTACATTTTATTCTTTATTCCTACAAAAAAAAGTGTGGC