Homologs in group_4528

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4528

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4528

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10385
Feature type CDS
Gene -
Product type II toxin-antitoxin system YafO family toxin
Location 2279953 - 2280363 (strand: 1)
Length 411 (nucleotides) / 136 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4528
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF13957 Toxin YafO, type II toxin-antitoxin system

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19160 mRNA interferase YafO [EC:3.1.-.-] - -

Protein Sequence

MPIVTITPRYKDNGVYRKYAAKLSAALNGSSLSGYVGKFADFRNSAIARQSFIEKVHIRTPNEKPWDGETRQAVRVSDNFLVFCKHCMYDDYYQILAIITPDAHARSAALLPILADMAETYFHSLSLKELAGLDQF

Flanking regions ( +/- flanking 50bp)

AATTCCTCAATAGCTGAATTTAATCAAGATCTGCTTGCAGGTAACTTGCAATGCCGATAGTCACAATCACGCCCAGATATAAAGATAACGGTGTTTATCGGAAGTATGCGGCTAAGCTATCAGCTGCTCTTAATGGCTCATCCCTCTCTGGGTATGTAGGTAAATTTGCTGATTTTAGGAATAGCGCCATAGCGCGTCAGTCATTTATTGAAAAGGTTCATATAAGAACGCCAAATGAAAAACCTTGGGATGGCGAAACTCGACAGGCTGTTAGAGTGAGCGATAACTTTTTAGTGTTTTGTAAGCACTGTATGTACGATGATTATTACCAAATTCTGGCAATCATAACTCCTGATGCACATGCTCGTTCAGCTGCGTTGCTTCCAATATTGGCAGATATGGCAGAAACTTATTTTCATTCTTTATCGCTTAAAGAGTTAGCTGGATTAGATCAGTTCTAGCCACACATAGCTCAAGGACGACTTGCTTGAGATCACATAGCGGGTGGTTT