Homologs in group_4512

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4512

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4512

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P41059 9.4e-12 57 45 0 70 4 CP80 Uncharacterized 8.5 kDa protein in gpA 5'region Escherichia phage 186
Q06424 2.46e-10 53 45 0 71 4 ORF82 Uncharacterized 8.2 kDa protein in gpA 5'region Escherichia phage P2
P41065 1.66e-06 44 36 1 72 1 traR Protein TraR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09865
Feature type CDS
Gene -
Product TraR/DksA family transcriptional regulator
Location 2144013 - 2144234 (strand: -1)
Length 222 (nucleotides) / 73 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4512
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF01258 Prokaryotic dksA/traR C4-type zinc finger

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1734 Transcription (K) K RNA polymerase-binding transcription factor DksA

Protein Sequence

MSKEMDLACEQSQLLLDKQIKAVTGRYIGVSAFECEDCGREIPEKRRIAVMGCTRCADCQTVYELKSKHYRSV

Flanking regions ( +/- flanking 50bp)

ATTAGAAGGTGAAGCCGAGTCTATCGAACATCAAGCGCAGGAATGGAATTATGTCTAAAGAAATGGATTTAGCCTGCGAACAATCACAGTTATTGCTTGATAAACAAATAAAAGCAGTAACAGGGCGTTACATAGGTGTATCAGCGTTTGAATGTGAAGATTGCGGTCGTGAAATACCCGAAAAGCGCCGTATTGCGGTAATGGGATGCACTCGCTGTGCAGATTGCCAAACGGTGTATGAGCTGAAATCTAAGCATTATCGGAGTGTGTGAAATGGCGAATAAAACCATTCTGAAATGGGCTGGCTCAAAAGCCCGCATCA