Homologs in group_4507

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4507

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4507

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25479 0.0 763 61 6 593 4 P Terminase, ATPase subunit Escherichia phage P2
P51718 1.18e-140 424 41 11 576 4 None Probable terminase, ATPase subunit Haemophilus phage HP1 (strain HP1c1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09825
Feature type CDS
Gene -
Product terminase ATPase subunit family protein
Location 2135046 - 2136800 (strand: 1)
Length 1755 (nucleotides) / 584 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4507
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF03237 Terminase large subunit, T4likevirus-type, N-terminal
PF06056 Putative ATPase subunit of terminase (gpP-like)
PF17289 Terminase RNaseH-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5484 Function unknown (S) S Uncharacterized conserved protein YjcR, contains N-terminal HTH domain

Protein Sequence

MTITETFDNRKKAMHLYFAGYRIARIAESLGEKASTIHSWKRRDNWDEISPTERAELTVEARYCNLILKESKEGKDFKEIDLLGRQLERMARIRKYQNGGNETDLNPKIANRNKGERRQPEKNFFSEEQIEKLEDIFRNTLFEYQKVWYRAGHHRIRNILKSRQIGATFYFAREAFIDALTTGRNQVFLSASKAQAYMFREYIIKMALEVDVELKGDPLMLSNGATLYFLGTNARTAQSYHGNLYLDETFWIPKFQELRKVTSGMAIQKHWRQTYFSTPSTMSHEAYPFWSGKLYNRGRKKEDRVDIDISHEALVNGRLCEDGQWRQIVNIEDALRGGCDLFDLEQLKKEYSPDEYNNLLMCHFMDDIESLFNFNMMQNCMVDSWEVWDDIQPLALRPYGYDPVWVGYDPSKGGENGDSAGCVVIAPPKVPGGKFRILERHQWRGMDFRAQADAIKKITERFYVEYMGIDTTGLGHGVYQNVIQFFPAAREFIYNPNVKNALVIKAYDVISHGRLEFDAQCVDIIQSFTSIRRTTTGSGNRPTYEASRSEESGHADLAWATMHALFNEPLTGTTENSNNIVEIY

Flanking regions ( +/- flanking 50bp)

CAGCGGTCAATAGACTAGCCGTAACTTAAGCAAGAAATCGTGATTGTGCAATGACTATTACAGAAACATTTGATAACCGAAAAAAAGCAATGCACCTGTATTTTGCCGGTTACCGCATTGCTCGCATAGCGGAATCGCTAGGCGAAAAGGCGTCCACGATTCACAGTTGGAAACGCCGCGATAATTGGGATGAAATCAGCCCTACCGAACGCGCAGAGCTAACCGTTGAGGCACGTTATTGCAATCTAATTTTAAAAGAGAGCAAAGAAGGCAAAGATTTTAAAGAAATCGACTTGTTAGGACGTCAACTCGAACGCATGGCGCGGATCAGAAAATATCAAAACGGCGGTAATGAAACGGACCTTAATCCTAAGATTGCCAACCGCAACAAAGGCGAACGCCGTCAGCCAGAGAAAAACTTCTTTTCAGAAGAACAAATTGAAAAACTGGAAGATATCTTTCGCAATACGTTGTTTGAATATCAAAAGGTGTGGTATCGCGCCGGTCATCACCGTATCCGCAATATTTTAAAATCCCGTCAAATCGGCGCAACATTCTACTTTGCTCGAGAAGCCTTTATTGATGCCCTGACCACCGGACGTAATCAGGTTTTCCTCTCCGCCAGTAAAGCGCAAGCCTATATGTTCCGTGAATACATTATCAAAATGGCATTGGAGGTTGATGTTGAATTAAAAGGCGACCCATTGATGTTAAGCAACGGTGCAACGCTCTATTTCCTTGGCACTAATGCACGCACAGCACAAAGTTATCACGGTAATTTATATCTGGATGAAACCTTTTGGATCCCGAAATTTCAGGAGTTACGCAAAGTGACTTCGGGTATGGCGATACAAAAACATTGGCGACAAACCTACTTTTCAACACCATCAACCATGAGCCATGAAGCCTATCCGTTTTGGTCGGGTAAGTTGTATAACCGCGGACGCAAAAAAGAAGATCGCGTTGATATTGATATCTCACATGAAGCCTTAGTCAATGGACGTTTATGTGAAGATGGGCAATGGCGACAAATCGTCAATATTGAAGATGCACTACGAGGCGGTTGTGATTTATTCGATTTAGAGCAACTCAAAAAAGAGTATAGCCCGGACGAATATAACAACCTGTTAATGTGTCACTTTATGGATGATATCGAATCCCTATTCAACTTTAACATGATGCAAAACTGCATGGTGGACAGTTGGGAAGTGTGGGACGACATTCAACCGTTAGCGCTGCGCCCTTATGGTTATGATCCGGTTTGGGTAGGTTACGACCCCAGCAAAGGCGGTGAAAATGGTGATAGTGCCGGTTGTGTGGTTATCGCGCCGCCGAAAGTACCCGGAGGAAAATTCCGCATATTAGAACGCCATCAATGGCGTGGTATGGATTTTCGCGCACAAGCTGACGCCATTAAAAAAATCACCGAACGTTTCTATGTGGAATATATGGGTATTGATACCACCGGCTTAGGACATGGGGTTTATCAGAATGTTATCCAGTTTTTCCCTGCTGCGCGTGAGTTTATTTATAACCCGAATGTCAAAAATGCCTTAGTCATTAAAGCCTATGACGTGATTAGTCACGGGCGCTTAGAGTTCGATGCGCAGTGCGTTGATATCATTCAATCCTTTACATCCATTCGTCGTACCACCACCGGAAGCGGTAACCGCCCAACCTATGAGGCCTCGCGCAGTGAAGAAAGCGGACACGCTGACCTTGCATGGGCAACGATGCATGCCCTTTTCAACGAACCATTAACCGGCACCACCGAGAACAGTAATAACATTGTGGAGATTTATTGATGAGCCGTAAAAATAAAAAACGTTTTAAAACACAACAAACGGCAACCGCC