Homologs in group_3817

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS02470 F4V73_RS02470 29.4 Morganella psychrotolerans - P2 family phage major capsid protein

Distribution of the homologs in the orthogroup group_3817

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3817

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25477 2.29e-136 396 54 3 358 1 N Capsid proteins Escherichia phage P2
P85990 3.2e-73 234 36 5 353 1 None Major capsid protein Serratia phage KSP20
P51720 1.04e-24 106 30 11 299 3 None Major capsid protein Haemophilus phage HP1 (strain HP1c1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09815
Feature type CDS
Gene -
Product phage major capsid protein, P2 family
Location 2132903 - 2134048 (strand: -1)
Length 1146 (nucleotides) / 381 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3817
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF05125 Phage major capsid protein, P2 family

Protein Sequence

MKKETRFKFNAYLTQLGKIYGVSAQAFSDTKVQIEPSAAQTLETNIQQSAEFLTHVNIVPVDEQVGEAIGLGIGSTIAGTTDTTAKERETSDPIKLTKNSYHCQKTNYDTHLDYAKIDMWAKFTDFQTRIRDAIIRRQALDRIMIGFNGTHRADNSDRTKYPLLQDVNSGWLQKVRERAPEHVMGSETKDGATTAQPILVGKGQAYQNLDALVQDTVDTAIDPEYQDDTGLVVICGRKLLADKYFPLVNKDQDNSEKLAADTIISQKRIGGLPAVRAPFFPGNAFFITRLDNLSIYFLADSRRRQVLDNPKRDRIENYESVNEDFVVEDFRGVALVENIVFEDVKETQPETKKEGGASENEVVKDDKAVTEETPTENKKAK

Flanking regions ( +/- flanking 50bp)

GCGAAAATAATAGCGAAGTGCTGACGGATTGCTAAGGTAGTGAACAGACCATGAAAAAAGAAACTCGTTTTAAATTTAATGCGTACCTCACGCAACTCGGTAAAATTTACGGTGTTAGCGCGCAAGCGTTTAGTGATACAAAGGTTCAAATTGAACCGTCTGCCGCGCAAACGCTGGAAACCAATATTCAGCAGTCAGCAGAATTTTTAACACACGTTAATATCGTGCCCGTTGATGAGCAAGTGGGTGAGGCCATCGGTTTAGGTATCGGCTCAACTATCGCAGGCACTACCGATACAACAGCAAAAGAGCGCGAAACAAGTGATCCGATTAAGCTGACCAAAAATAGCTATCATTGCCAGAAAACCAATTACGACACCCACCTTGATTACGCCAAAATTGATATGTGGGCGAAGTTTACCGACTTTCAAACCCGTATCCGCGATGCGATTATTCGCCGTCAGGCATTAGACCGCATTATGATTGGTTTTAATGGTACGCACCGCGCCGATAATTCTGATCGGACAAAATACCCCTTACTGCAAGATGTGAATTCAGGCTGGTTACAAAAAGTCCGTGAGCGTGCACCAGAGCATGTGATGGGCAGTGAAACGAAAGACGGCGCAACCACAGCCCAGCCTATTCTGGTCGGTAAAGGGCAAGCTTATCAAAATCTTGATGCATTAGTGCAAGATACGGTCGATACTGCGATTGATCCTGAATATCAGGACGATACCGGTCTTGTTGTGATTTGTGGCCGTAAATTATTAGCAGATAAATATTTTCCACTGGTTAATAAAGACCAAGATAACAGTGAAAAACTGGCGGCAGATACCATTATCAGCCAGAAACGTATCGGCGGTTTGCCTGCTGTACGTGCGCCGTTCTTTCCTGGCAATGCATTTTTTATCACTCGCCTTGATAACTTGTCGATTTATTTCCTTGCGGATTCTCGTCGTCGTCAAGTGTTAGATAACCCAAAACGCGATCGCATCGAAAACTACGAGTCAGTGAATGAAGATTTTGTGGTTGAAGATTTTCGCGGTGTGGCACTGGTCGAAAATATTGTTTTTGAAGATGTAAAAGAGACACAGCCAGAAACAAAAAAAGAGGGGGGAGCTTCTGAAAATGAAGTCGTCAAAGACGACAAAGCAGTAACAGAAGAAACACCAACTGAAAATAAAAAGGCGAAATAATGGCATTATCTCCGTGGGAAAAACACCGCATGAGCCTTAGCGCGCAACAG