Homologs in group_4506

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4506

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4506

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25476 9.76e-48 160 43 1 218 4 M Terminase, endonuclease subunit Escherichia phage P2
P51721 1.45e-05 48 26 3 126 4 None Probable terminase, endonuclease subunit Haemophilus phage HP1 (strain HP1c1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09810
Feature type CDS
Gene gpM
Product phage terminase small subunit
Location 2132235 - 2132903 (strand: -1)
Length 669 (nucleotides) / 222 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4506
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF05944 Phage small terminase subunit

Protein Sequence

MALSPWEKHRMSLSAQQSSQLGGHVSRNTQGYHMMLLRLATDKKELKHFQSRERKEAYKRKILANYQPWVDGALSGGSGVQDDVLMTILLWKIDAGDYEGALDIAVYALANRLVIPGVNRTTGTVIAEEIADSAMRAYAVKSPVSLATLERTRALTDDEDMPDEVRAKLYKILGLVLRDNNRPQESYCVLSRALELNMNIGVKTELKQLDKVLKAQRDAEKA

Flanking regions ( +/- flanking 50bp)

GACAAAGCAGTAACAGAAGAAACACCAACTGAAAATAAAAAGGCGAAATAATGGCATTATCTCCGTGGGAAAAACACCGCATGAGCCTTAGCGCGCAACAGTCCAGCCAATTGGGTGGGCATGTTAGCCGCAATACACAGGGCTATCACATGATGCTGTTACGTCTTGCGACAGATAAAAAAGAGCTAAAACATTTTCAGTCACGCGAACGCAAAGAAGCTTATAAGCGCAAGATATTAGCCAATTATCAGCCGTGGGTTGATGGGGCATTGTCCGGTGGTAGCGGTGTGCAAGATGATGTCTTAATGACGATTTTGCTGTGGAAAATTGATGCGGGGGATTATGAGGGGGCGTTAGATATTGCCGTTTACGCATTAGCTAACCGTTTAGTGATCCCCGGTGTGAACCGCACCACGGGCACCGTGATTGCCGAAGAAATCGCCGATTCTGCCATGCGAGCGTATGCCGTGAAATCACCGGTTTCATTGGCAACATTAGAGCGTACACGTGCTTTGACCGATGATGAAGATATGCCTGATGAAGTAAGGGCAAAACTCTACAAAATCTTAGGGTTAGTGCTACGCGATAATAATCGCCCACAAGAAAGCTACTGCGTATTAAGTCGAGCCTTAGAGTTAAACATGAATATCGGTGTGAAAACCGAATTAAAACAACTCGATAAAGTGCTTAAAGCCCAGCGTGACGCTGAAAAAGCATAGTGACACCACGTCAGGGCGGCACGGAAAAAGCAATTTGCTTTCTTTCGTCC