Homologs in group_4505

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4505

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4505

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25475 7.35e-36 124 43 2 148 2 L Head completion/stabilization protein Escherichia phage P2
P51722 1e-06 48 32 2 98 4 None Probable head completion/stabilization protein Haemophilus phage HP1 (strain HP1c1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09805
Feature type CDS
Gene -
Product head completion/stabilization protein
Location 2131702 - 2132157 (strand: -1)
Length 456 (nucleotides) / 151 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4505
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF05926 Phage head completion protein (GPL)

Protein Sequence

MDYVSANPVSQKDETIKNNGFFPDIQTRDFQLQTRVDGTVTPERLKSTLLNAMIEVNRELYQWRIGQAAKTLKEVPAEQINGESELMILYQRAVFCFAKASLIERYRDIDTTAQGNKKADTMTPAIDEVWRDGKWALQRIKGETHNTVELI

Flanking regions ( +/- flanking 50bp)

AAGCAATTTGCTTTCTTTCGTCCACCGCCCACCTATTTTAAGGTTTTCTTATGGATTATGTTTCTGCTAACCCTGTGTCACAAAAAGACGAAACCATTAAAAACAATGGCTTTTTCCCTGATATTCAAACTCGTGATTTTCAATTGCAAACTCGCGTCGATGGCACTGTGACACCGGAACGGCTGAAAAGCACGTTATTGAACGCCATGATTGAAGTGAATCGTGAATTGTATCAGTGGCGTATTGGTCAAGCTGCGAAAACATTAAAAGAGGTGCCTGCCGAACAGATTAACGGTGAAAGTGAATTGATGATTTTATATCAGCGAGCGGTGTTCTGTTTTGCAAAGGCCAGTTTAATCGAACGTTATCGCGATATTGATACTACCGCACAAGGTAATAAAAAAGCCGACACCATGACGCCGGCTATTGATGAAGTGTGGCGTGATGGCAAGTGGGCGTTACAACGTATCAAAGGGGAAACCCATAACACGGTGGAGCTTATCTGATGCGGATTTATACCCAACAAGGGGATACCGTCGATGATATTTGTTGGCGT