Homologs in group_4501

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4501

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4501

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P51768 3.49e-33 114 45 1 111 3 W Baseplate protein W Escherichia phage P2

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09765
Feature type CDS
Gene -
Product GPW/gp25 family protein
Location 2128201 - 2128539 (strand: -1)
Length 339 (nucleotides) / 112 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4501
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF04965 Baseplate wedge protein gp25

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3628 Mobilome: prophages, transposons (X) X Phage baseplate assembly protein W

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06903 Bacteriophage baseplate protein W - -

Protein Sequence

MNYLGMNAQTGEHITDIEHVRQSIKDIFNTPIGSRLMRREYGSLLADLIDGPVNAKMRLQLMSACYTAVYRWEPRIVMTAIDIHSQHEQVIVDITGYYAHNQQPINFSLPVT

Flanking regions ( +/- flanking 50bp)

CATACCCACAGTGGTGTGCGTACCGGTGATGGTAATACGGGGCAACCGCAATGAACTATCTCGGCATGAATGCACAAACCGGTGAACATATTACCGATATTGAGCACGTTCGCCAGTCTATTAAAGATATTTTTAATACCCCCATTGGTAGCCGATTGATGCGCCGTGAATATGGTAGTTTGCTGGCCGATTTAATTGATGGCCCAGTTAACGCCAAGATGCGATTGCAATTAATGTCAGCGTGTTACACCGCAGTTTATCGTTGGGAGCCACGTATTGTGATGACGGCCATTGATATTCATAGCCAACACGAACAGGTGATTGTCGATATCACCGGCTATTACGCCCATAACCAACAACCGATTAATTTCTCTCTACCGGTGACATAACATGCCTACGATTAACTTAAGCCAATTAACACCGCCCGATGTGATTGAGT