Homologs in group_4497

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4497

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4497

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P22502 1.12e-66 204 56 1 172 1 FII Tail tube protein Escherichia phage P2
P85988 5.11e-45 149 45 3 172 1 None Major tail tube protein Serratia phage KSP20

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09740
Feature type CDS
Gene -
Product phage major tail tube protein
Location 2123275 - 2123790 (strand: -1)
Length 516 (nucleotides) / 171 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4497
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF04985 Phage tail tube protein FII

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3498 Mobilome: prophages, transposons (X) X Phage tail tube protein FII

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06908 Bacteriophage tail tube protein - -

Protein Sequence

MALPRKLKNFNLFMNGTNYVGVAEELTLPKITRKLEAYRGGGMNGSVQIDMGLDDGALDSEFTLGGADIDVYRQWGASTIDAVQLRFCGAYQRDDTGEVLAVEVVLRGRYSEIDPGNWKSGDNTQTKVTVKPTYYKLVMDGQEIIEIDIVNMVEKVDGKDLLQAQRDALGL

Flanking regions ( +/- flanking 50bp)

TTACCGATAAATACCTGATGGACTTCGGTAACAAAATTAAGGGGTAAATCATGGCGTTACCACGCAAGCTAAAGAATTTTAATTTATTTATGAATGGCACCAATTATGTGGGCGTTGCGGAAGAACTCACATTACCCAAAATCACCCGAAAGTTAGAAGCCTATCGCGGGGGCGGTATGAATGGTTCGGTGCAAATTGATATGGGTCTTGATGACGGCGCGCTTGATAGTGAGTTTACTCTCGGTGGTGCTGATATCGACGTTTACCGCCAATGGGGTGCCTCAACCATTGATGCCGTACAACTGCGTTTTTGTGGTGCTTATCAGCGTGATGATACGGGGGAAGTGCTTGCTGTAGAGGTGGTTCTGCGTGGCCGTTATAGCGAAATCGATCCGGGTAACTGGAAATCAGGCGACAACACACAAACCAAAGTTACCGTAAAACCCACTTACTACAAGTTAGTGATGGACGGCCAAGAAATCATTGAAATTGATATCGTCAATATGGTGGAAAAAGTGGACGGTAAAGACCTGTTACAAGCACAGCGTGACGCGCTAGGGCTTTAATTAAATTCGGAAAGAGAACATGAAAAAGCCAATCGAAGAACAAAACCAAG