Homologs in group_4493

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4493

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4493

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P21679 3.87e-144 416 55 1 376 3 D Probable baseplate hub protein Escherichia phage 186
P10312 3.24e-137 399 53 3 375 3 D Probable baseplate hub protein Escherichia phage P2

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09720
Feature type CDS
Gene -
Product phage late control D family protein
Location 2118386 - 2119483 (strand: -1)
Length 1098 (nucleotides) / 365 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4493
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF05954 Phage tail baseplate hub (GPD)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3500 Mobilome: prophages, transposons (X) X Phage protein D

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06905 Bacteriophage probable baseplate hub protein - -

Protein Sequence

MLPEMITGKSSIPAFVLIAGDEDISAKIQGRLISLSLTDNRGFEADQLDIELDDSDGALMMPKRGEVLTLHLGWQGERLIHKGSFTVDEIEHSGVPDKMTLRARSADFRATLNVRREMSYHQKTLGDIVRTIAGRNNVAAVVDPGLDTVKIEHIDQTNESDGSFLTRLGQLNGATACVKNGNLLFMVQGGNTTASGQALPLVQITRSVGDGHRFSLVDRGAYTGVTANYLNTRKPQEKTQSQIRRRKPTTNKPKKEEEKQGEYLVGEEGNVMVLSHTYASKTNAERAAKAAWEKIQRGVASFSITLAKGRADLFPELPVKVSGFKPEIDEAYWTLVTVSHSLNNSGFTTSLELEVKSSEIDMDKE

Flanking regions ( +/- flanking 50bp)

GGCATGATGGCCAATGGTGCCGGTGAAGCGATGAAAGGAGTTTTATCATAATGTTGCCAGAAATGATCACCGGTAAAAGTAGCATACCGGCCTTTGTGTTAATTGCTGGTGATGAAGATATCAGTGCCAAAATTCAAGGGCGATTAATTTCGCTTTCATTAACGGACAATCGGGGCTTTGAAGCTGACCAGCTTGATATTGAGTTAGATGATTCTGATGGCGCATTAATGATGCCAAAACGCGGTGAGGTATTAACTTTACATCTCGGTTGGCAGGGGGAAAGACTTATTCATAAAGGCTCGTTTACGGTTGATGAGATAGAGCATTCAGGTGTACCCGATAAAATGACATTGCGCGCCCGTAGTGCGGATTTTAGGGCAACGCTGAATGTGCGCCGTGAAATGTCGTATCATCAAAAAACATTAGGCGATATCGTCAGAACGATTGCAGGGCGCAATAATGTCGCGGCGGTGGTTGATCCTGGTCTTGATACGGTGAAAATTGAACATATCGATCAGACCAATGAGTCAGACGGCAGTTTTTTAACCCGCTTAGGGCAATTAAACGGTGCCACCGCCTGTGTTAAAAACGGCAATTTGCTGTTTATGGTGCAGGGGGGCAATACCACCGCCAGTGGTCAAGCATTACCGCTAGTACAAATTACCCGAAGTGTGGGTGATGGACACCGTTTTTCATTAGTGGATAGGGGCGCTTACACTGGTGTGACGGCCAATTATTTAAATACCCGTAAACCGCAAGAAAAAACACAGTCACAAATTCGCCGTAGAAAACCCACTACCAATAAACCGAAAAAAGAAGAGGAGAAACAAGGGGAGTACCTTGTCGGTGAAGAAGGTAATGTGATGGTGTTGTCTCATACTTATGCGAGTAAAACCAATGCTGAACGTGCCGCGAAAGCCGCGTGGGAAAAAATACAGCGAGGTGTTGCCTCTTTTAGTATTACCCTTGCGAAAGGGCGTGCGGATCTCTTTCCTGAATTACCTGTAAAGGTTAGCGGATTTAAGCCTGAGATTGATGAGGCCTATTGGACGTTGGTCACGGTGAGTCATTCCTTGAACAATAGCGGATTTACCACCTCGTTAGAATTAGAAGTTAAAAGCAGTGAGATAGATATGGATAAGGAATAGTGCCTGTGTATAATTACAGGTAATTTCCACATCATAAAGAGGTAACCCGT