Homologs in group_3896

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS15055 PMI_RS15055 51.3 Proteus mirabilis HI4320 - lactate utilization protein C

Distribution of the homologs in the orthogroup group_3896

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3896

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77433 1.05e-87 262 56 2 230 3 ykgG Uncharacterized protein YkgG Escherichia coli (strain K12)
B9E9H0 6.11e-46 155 40 6 232 3 lutC Lactate utilization protein C Macrococcus caseolyticus (strain JCSC5402)
Q9KBU0 2.22e-45 154 38 5 237 3 lutC Lactate utilization protein C Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
A9VI78 3.77e-44 151 36 4 238 3 lutC1 Lactate utilization protein C 1 Bacillus mycoides (strain KBAB4)
C5D585 1.62e-43 149 35 2 234 3 lutC Lactate utilization protein C Geobacillus sp. (strain WCH70)
Q65EM1 5.73e-43 148 37 2 234 3 lutC Lactate utilization protein C Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
A4IK94 1.63e-42 147 35 4 236 3 lutC Lactate utilization protein C Geobacillus thermodenitrificans (strain NG80-2)
Q5L302 4.12e-41 143 33 4 242 3 lutC Lactate utilization protein C Geobacillus kaustophilus (strain HTA426)
O32259 7.2e-41 142 37 4 242 1 lutC Lactate utilization protein C Bacillus subtilis (strain 168)
B9IUP5 2.67e-40 141 34 2 232 3 lutC Lactate utilization protein C Bacillus cereus (strain Q1)
B7I0L1 2.67e-40 141 34 2 232 3 lutC Lactate utilization protein C Bacillus cereus (strain AH187)
Q73BK0 6.89e-40 140 34 2 232 3 lutC Lactate utilization protein C Bacillus cereus (strain ATCC 10987 / NRS 248)
Q6HLP0 1.58e-39 139 34 4 234 3 lutC Lactate utilization protein C Bacillus thuringiensis subsp. konkukian (strain 97-27)
A7Z900 9.21e-39 137 36 4 234 3 lutC Lactate utilization protein C Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q63E65 1.71e-38 136 34 4 234 3 lutC Lactate utilization protein C Bacillus cereus (strain ZK / E33L)
C1EM12 1.71e-38 136 34 4 234 3 lutC Lactate utilization protein C Bacillus cereus (strain 03BB102)
B7JF02 1.71e-38 136 34 4 234 3 lutC Lactate utilization protein C Bacillus cereus (strain AH820)
Q81TG0 1.71e-38 136 34 4 234 3 lutC Lactate utilization protein C Bacillus anthracis
A0RBC9 1.71e-38 136 34 4 234 3 lutC Lactate utilization protein C Bacillus thuringiensis (strain Al Hakam)
C3LAQ2 1.71e-38 136 34 4 234 3 lutC Lactate utilization protein C Bacillus anthracis (strain CDC 684 / NRRL 3495)
C3P4C5 1.71e-38 136 34 4 234 3 lutC Lactate utilization protein C Bacillus anthracis (strain A0248)
B7GLD4 5.94e-37 132 33 5 231 3 lutC Lactate utilization protein C Anoxybacillus flavithermus (strain DSM 21510 / WK1)
Q8ET90 9.43e-37 132 32 4 235 3 lutC Lactate utilization protein C Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q5WJD9 1.62e-36 131 34 5 239 3 lutC Lactate utilization protein C Shouchella clausii (strain KSM-K16)
A7GMJ4 2.71e-36 130 33 4 233 3 lutC Lactate utilization protein C Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
B7IMD5 8.33e-36 129 33 4 234 3 lutC Lactate utilization protein C Bacillus cereus (strain G9842)
C4L0S0 1.36e-35 129 34 5 233 3 lutC Lactate utilization protein C Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
A9VKN2 4.11e-35 127 32 2 232 3 lutC2 Lactate utilization protein C 2 Bacillus mycoides (strain KBAB4)
Q81GA3 6.79e-35 127 32 4 234 3 lutC Lactate utilization protein C Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7HH60 1.78e-34 126 33 6 242 3 lutC Lactate utilization protein C Bacillus cereus (strain B4264)
A8FDN6 2.83e-34 125 33 4 234 3 lutC Lactate utilization protein C Bacillus pumilus (strain SAFR-032)
Q9JYT7 4.66e-10 61 36 2 91 1 NMB1437 Uncharacterized protein NMB1437 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9RT57 3.72e-07 52 31 3 109 1 lutC Lactate utilization protein C Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09550
Feature type CDS
Gene -
Product lactate utilization protein C
Location 2085070 - 2085774 (strand: 1)
Length 705 (nucleotides) / 234 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3896
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF02589 LUD domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1556 Energy production and conversion (C) C L-lactate utilization protein LutC, contains LUD domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00782 L-lactate dehydrogenase complex protein LldG - -

Protein Sequence

MLNEQNRAEFLQTIAQKLGREVTHTPKPQDPPINNLAKTRLTNLTQDELCKEFTDFAQTQQVRCVITKPEQVINSLIALCESYDCQGSVIISGDERLNALGVTQAISEKYETYIWDPKLGHENIIHAERSQIGIVFAEAGLTESGGIVLFSSPEKGRSVSLLPETSIVILRKSDILPRVAQLAERLHKMAQDGIRMPSCINLIGGASSTADIELIKVWGVHGPVHAAYLIIEDC

Flanking regions ( +/- flanking 50bp)

TAGTTTCCGTAGTTGGTTTAAGCGCCACAAAGCAGAAGGAAAAAAATAATATGTTAAACGAACAAAATCGTGCTGAGTTTCTGCAAACTATTGCTCAAAAATTAGGACGTGAGGTGACGCATACGCCAAAACCACAAGATCCCCCTATTAATAATTTAGCTAAAACACGCTTAACAAATTTAACCCAAGATGAATTATGCAAAGAATTTACTGATTTTGCACAAACCCAGCAAGTAAGATGCGTTATCACTAAACCAGAACAAGTGATAAATAGCTTAATAGCGCTTTGTGAAAGCTATGATTGTCAAGGTTCAGTGATAATAAGTGGTGATGAGCGCTTAAATGCACTTGGTGTAACACAAGCTATTAGTGAAAAATATGAAACTTATATTTGGGATCCTAAACTCGGTCATGAAAATATTATTCATGCTGAGCGCTCTCAAATAGGGATTGTCTTTGCGGAAGCGGGATTAACAGAATCTGGCGGGATTGTGCTGTTTTCTTCTCCGGAAAAAGGGCGTTCTGTCAGCCTGTTACCTGAAACCTCGATTGTTATTTTACGCAAAAGTGACATTTTACCGCGAGTGGCTCAACTTGCAGAGCGTTTACACAAAATGGCACAAGATGGGATCAGAATGCCTTCATGTATCAATTTAATTGGTGGTGCAAGCTCAACGGCTGATATTGAATTAATCAAAGTATGGGGAGTTCATGGTCCAGTTCATGCCGCTTATCTTATTATTGAAGATTGTTAGTTTAAACGAAACAATATAAAAACGATAACCAAATAACTTAACGTCATGGT