Homologs in group_4483

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4483

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4483

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P13476 2.65e-34 116 67 0 83 1 imm Colicin-E5 immunity protein Escherichia coli
Q57300 1.51e-33 114 66 0 83 4 None Colicin-E5 immunity protein in ColE9 Escherichia coli
H9T8I0 2.05e-11 58 31 1 101 1 cdiI Immunity protein CdiI Burkholderia pseudomallei

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09425
Feature type CDS
Gene -
Product colicin transporter
Location 2054551 - 2054886 (strand: -1)
Length 336 (nucleotides) / 111 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4483
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF11480 Colicin-E5 Imm protein

Protein Sequence

MMEKKLFDYNVLYNNGEEFFKLKGNACMYLSPKAAIEVCQEATKRNLWISGIDGGHWLNPGFRPDGSASWSGKTKLFNENKISENNQLAIENIQEDAAAGYTAFIVTLRMP

Flanking regions ( +/- flanking 50bp)

AAAAATGATCCTAGATGGATTGATGACTCACGAATTCAATGGGAGAAACAATGATGGAAAAAAAATTATTTGATTACAACGTATTATATAACAATGGTGAAGAATTCTTTAAATTAAAAGGCAACGCCTGCATGTACTTATCACCAAAAGCTGCAATTGAAGTGTGTCAGGAGGCAACAAAGCGTAATCTGTGGATTTCAGGTATCGATGGTGGTCACTGGCTGAATCCTGGATTCCGTCCAGATGGAAGTGCATCTTGGTCAGGCAAAACTAAATTATTTAATGAGAACAAAATATCAGAAAATAATCAGTTGGCCATTGAAAATATTCAGGAAGATGCTGCAGCCGGATATACAGCATTCATTGTCACGTTAAGAATGCCTTAATTTTTTAAGGGATGAAATAAAACGATACCCGTTACTTGCGGATGAGTGGC