Homologs in group_3821

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS02620 F4V73_RS02620 39.6 Morganella psychrotolerans - colicin E1 family microcin immunity protein

Distribution of the homologs in the orthogroup group_3821

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3821

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P08701 1.79e-19 79 38 0 100 4 None Colicin-Ia immunity protein Escherichia coli
P08702 5.92e-11 58 34 2 93 4 None Colicin-Ib immunity protein Escherichia coli
P02985 4.6e-06 45 30 2 104 4 imm Colicin-E1 immunity protein Escherichia coli
P33637 1.67e-05 43 29 2 104 4 imm Colicin-E1 immunity protein Escherichia coli

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09410
Feature type CDS
Gene -
Product colicin E1 family microcin immunity protein
Location 2051761 - 2052096 (strand: 1)
Length 336 (nucleotides) / 111 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3821
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF03526 Colicin E1 (microcin) immunity protein

Protein Sequence

MTKKYYIHNMFWGYFMMLVMIYLNYNDHTIESVLMLTLSIPSAIFFPFSKMLIEKFTLKYTTKKFWNTGLFINTPAKHGGVALYHLFCFIFSIPFSMIYLALYFTKNRITN

Flanking regions ( +/- flanking 50bp)

TAATATGGGTATCCTATAAAATAGGACTAATTATTCATTAGGAGCTGAATATGACTAAAAAATATTATATTCATAATATGTTCTGGGGCTATTTTATGATGTTGGTGATGATTTATCTTAATTATAACGATCACACTATTGAAAGCGTATTAATGCTAACTTTAAGCATACCTAGTGCAATTTTTTTTCCTTTCTCCAAGATGCTTATCGAAAAATTCACATTAAAATATACAACAAAAAAATTCTGGAATACTGGATTATTTATAAATACACCAGCTAAACATGGTGGAGTAGCTCTATACCACTTATTTTGTTTTATATTTTCAATTCCATTTAGCATGATATATCTAGCTCTATATTTCACAAAAAATAGGATAACCAATTAAAATCGATTATCCTATTAGCCTACATATTAAATACCTATCGCACTGCTGAC