Homologs in group_509

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01040 FBDBKF_01040 68.5 Morganella morganii S1 bamB outer membrane protein assembly factor BamB
EHELCC_00505 EHELCC_00505 68.5 Morganella morganii S2 bamB outer membrane protein assembly factor BamB
NLDBIP_02955 NLDBIP_02955 68.5 Morganella morganii S4 bamB outer membrane protein assembly factor BamB
LHKJJB_04470 LHKJJB_04470 68.5 Morganella morganii S3 bamB outer membrane protein assembly factor BamB
HKOGLL_02575 HKOGLL_02575 68.5 Morganella morganii S5 bamB outer membrane protein assembly factor BamB
F4V73_RS07115 F4V73_RS07115 69.0 Morganella psychrotolerans bamB outer membrane protein assembly factor BamB

Distribution of the homologs in the orthogroup group_509

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_509

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7CJM5 0.0 548 65 1 393 3 bamB Outer membrane protein assembly factor BamB Yersinia pestis
H9L451 3.52e-174 494 63 2 378 3 bamB Outer membrane protein assembly factor BamB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q32D50 2.14e-173 491 63 2 378 3 bamB Outer membrane protein assembly factor BamB Shigella dysenteriae serotype 1 (strain Sd197)
P77774 8.2e-173 490 63 2 378 1 bamB Outer membrane protein assembly factor BamB Escherichia coli (strain K12)
F7XXL0 2.95e-130 382 50 2 372 3 bamB Outer membrane protein assembly factor BamB Moranella endobia (strain PCIT)
Q9KTW8 3.22e-114 341 43 1 384 3 bamB Outer membrane protein assembly factor BamB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q5E769 7.05e-114 340 41 2 390 3 bamB Outer membrane protein assembly factor BamB Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q8EC35 3.22e-98 300 39 2 384 3 bamB Outer membrane protein assembly factor BamB Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
F5ZAY7 2.81e-83 263 35 3 371 3 bamB Outer membrane protein assembly factor BamB Alteromonas naphthalenivorans
C7R5S3 2.14e-74 239 33 4 378 3 bamB Outer membrane protein assembly factor BamB Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125)
E4PKG3 2.15e-61 205 32 3 373 3 bamB Outer membrane protein assembly factor BamB Marinobacter adhaerens (strain DSM 23420 / HP15)
Q8P980 7.97e-59 199 33 4 397 3 bamB Outer membrane protein assembly factor BamB Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q5X521 7.56e-58 196 30 4 389 3 bamB Outer membrane protein assembly factor BamB Legionella pneumophila (strain Paris)
Q9HXJ7 6.8e-54 186 30 2 373 1 bamB Outer membrane protein assembly factor BamB Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
C6BGE7 2.26e-51 179 32 8 377 3 bamB Outer membrane protein assembly factor BamB Ralstonia pickettii (strain 12D)
Q0AE45 4.35e-48 171 32 3 328 3 bamB Outer membrane protein assembly factor BamB Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57)
Q0A984 2.16e-46 166 30 1 330 3 bamB Outer membrane protein assembly factor BamB Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)
Q7VWL3 2.01e-44 161 29 6 387 3 bamB Outer membrane protein assembly factor BamB Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q63UT0 4.47e-44 160 29 8 377 3 bamB Outer membrane protein assembly factor BamB Burkholderia pseudomallei (strain K96243)
Q5NIB1 6.67e-43 158 26 7 396 3 bamB Outer membrane protein assembly factor BamB Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
F8GAQ8 2.82e-39 150 25 6 393 3 bamB Outer membrane protein assembly factor BamB Francisella salina
G4Q9J6 3.68e-38 144 25 5 394 3 bamB Outer membrane protein assembly factor BamB Taylorella asinigenitalis (strain MCE3)
Q92IV6 4.3e-14 76 22 3 253 4 RC0314 Uncharacterized protein RC0314 Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q9ZDU2 3.92e-13 73 21 3 253 4 RP232 Uncharacterized protein RP232 Rickettsia prowazekii (strain Madrid E)
Q9RRH3 3.74e-06 52 24 11 330 1 rqkA DNA damage-responsive serine/threonine-protein kinase RqkA Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q4L235 4.42e-06 52 19 12 320 1 AASDH Beta-alanine-activating enzyme Homo sapiens
P54742 8.1e-05 48 25 11 292 3 afsK Serine/threonine-protein kinase AfsK Streptomyces griseus
P54741 0.000636 45 28 3 120 1 afsK Serine/threonine-protein kinase AfsK Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q88JH0 0.00087 45 28 4 125 1 pedH Quinoprotein alcohol dehydrogenase PedH Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09090
Feature type CDS
Gene bamB
Product outer membrane protein assembly factor BamB
Location 1979353 - 1980525 (strand: -1)
Length 1173 (nucleotides) / 390 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_509
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13360 PQQ-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1520 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K17713 outer membrane protein assembly factor BamB - -

Protein Sequence

MQLRKTLLIGLLASALLAGCSSEQDNVTMSPLPEVQSQFTPYVVWDKSVGNGIGKYYSHLSPAWDGSVVYVADRHGVVKALELETGKEIWSQDLSTKKGFFSSNESALLSGGLTVSGTRVFVGTEKAKVYALNTDDGSIDWETDVAGEAISKPVVSDGLVLIHTSNGMLQGLDLLTGEVSWTVNLDTPSLSVRGESAPAVAYGAAIVGADNGRVSAVVLSQGQLVWQQNISQVKGSTEISRLNDVDITPIIDENTVYAMAYNGNLVSLDMRSGQIIWKRDLGSVNDMVLLGDNLYLVDQNDRVLAVRKSDGVTLWTQEDLLHRNLTAPAIVDGYLVVGDAEGYLHWIDTSTGKFIAQNKVNSSGLLSRPQAVQDKLMIQARDGKLYLYRR

Flanking regions ( +/- flanking 50bp)

TTGGTTGAACTTAAACTCAATAATTTATCCAATTAAAGGGATCTTCAGACATGCAACTGCGTAAAACTCTCCTGATCGGTCTACTAGCATCAGCATTATTAGCTGGGTGTTCTAGTGAGCAGGATAATGTGACAATGTCTCCATTGCCTGAGGTGCAGAGCCAATTTACCCCTTATGTGGTGTGGGACAAATCGGTTGGCAATGGTATTGGAAAATACTATTCCCACTTGTCACCAGCATGGGATGGTTCAGTTGTGTATGTCGCTGATCGCCATGGGGTAGTTAAAGCATTAGAATTAGAAACGGGTAAAGAGATTTGGTCTCAAGATCTCTCAACTAAAAAAGGTTTCTTCTCCTCTAATGAATCAGCATTACTTTCCGGTGGTTTAACCGTCTCTGGTACTCGTGTTTTTGTCGGCACAGAAAAAGCAAAAGTGTATGCTTTAAATACAGATGATGGCTCTATTGATTGGGAAACAGATGTTGCCGGAGAAGCGATTTCCAAACCTGTTGTTAGTGATGGTTTAGTGCTTATTCATACCAGTAACGGTATGTTGCAAGGGCTTGATTTGCTGACAGGTGAAGTATCATGGACGGTCAACTTAGATACACCATCATTATCCGTACGTGGTGAATCAGCACCGGCTGTTGCTTATGGTGCAGCGATTGTGGGCGCTGATAATGGCCGTGTTAGTGCGGTGGTGTTATCTCAAGGGCAATTAGTTTGGCAGCAAAATATTTCACAAGTGAAAGGCTCTACTGAGATCAGCCGCTTAAATGATGTCGATATTACGCCAATTATTGATGAAAATACTGTTTATGCCATGGCTTACAACGGTAATTTAGTCAGTCTAGATATGCGTTCAGGGCAGATCATCTGGAAACGTGATTTAGGTTCAGTTAATGACATGGTACTTTTGGGTGACAATCTATACCTTGTCGACCAAAATGACCGAGTTTTAGCTGTGCGCAAATCTGATGGTGTGACATTATGGACACAAGAAGATCTACTGCACCGTAATTTAACCGCCCCGGCTATCGTTGATGGTTATTTAGTGGTGGGAGATGCAGAAGGCTATCTCCATTGGATTGATACCAGTACAGGCAAATTTATTGCTCAAAATAAAGTCAATAGCTCAGGTTTATTAAGCCGTCCACAGGCTGTTCAAGATAAACTGATGATCCAAGCACGTGACGGTAAACTTTATCTATATCGTCGGTAATTAAGCACTGACAAATATAATTATTTTACGGCTCCTTTAAAGGAGCCGTT