Homologs in group_4482

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4482

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4482

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P05465 0.0 1102 67 1 786 3 gdhA Quinoprotein glucose dehydrogenase A Acinetobacter calcoaceticus
P15877 0.0 858 53 11 797 1 gcd Quinoprotein glucose dehydrogenase Escherichia coli (strain K12)
P27175 0.0 754 47 12 807 3 gdh Quinoprotein glucose dehydrogenase Gluconobacter oxydans (strain 621H)
Q59086 4.74e-174 524 37 17 813 1 quiA Quinate/shikimate dehydrogenase (quinone) Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q9XD78 1.38e-164 499 36 15 807 3 qumA Probable quinate dehydrogenase (quinone) Xanthomonas campestris pv. juglandis
Q8KIL1 7.17e-136 423 36 13 690 1 sldA Glycerol dehydrogenase large subunit Gluconobacter thailandicus
Q70JN9 3.5e-135 421 36 11 676 3 sldA Glycerol dehydrogenase large subunit Gluconobacter oxydans (strain 621H)
Q8GR64 1.58e-36 150 25 23 646 1 qbdA Quinohemoprotein alcohol dehydrogenase ADH IIB Pseudomonas putida
Q4W6G0 7.63e-33 139 23 21 698 1 qgdA Quinohemoprotein alcohol dehydrogenase ADH-IIG Pseudomonas putida
P18278 1.94e-28 125 24 20 656 1 adhA Alcohol dehydrogenase (quinone), dehydrogenase subunit Acetobacter aceti
Q9AF95 5.05e-28 124 24 25 652 1 bdh 1-butanol dehydrogenase (cytochrome c) Thauera butanivorans (strain ATCC 43655 / DSM 2080 / JCM 20651 / NBRC 103042 / IAM 12574 / Bu B1211)
Q46444 6.11e-27 120 24 24 655 1 qheDH Quinohemoprotein alcohol dehydrogenase Comamonas testosteroni
Q44002 5.69e-23 108 27 14 379 3 adhA Alcohol dehydrogenase (quinone), dehydrogenase subunit Komagataeibacter europaeus
P28036 6.24e-23 108 27 14 378 1 adhA Alcohol dehydrogenase (quinone), dehydrogenase subunit Gluconacetobacter polyoxogenes
O05542 1.19e-22 107 27 12 395 1 adhA Alcohol dehydrogenase (quinone), dehydrogenase subunit Gluconobacter oxydans (strain 621H)
Q9Z4J7 7.12e-22 104 24 11 383 1 exaA Quinoprotein ethanol dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9Z4J7 0.001 46 32 2 82 1 exaA Quinoprotein ethanol dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
C5AXV8 1.49e-20 100 24 11 359 1 exaF Lanthanide-dependent ethanol dehydrogenase Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
Q88JH5 5.44e-20 98 23 11 383 1 pedE Quinoprotein alcohol dehydrogenase PedE Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q88JH0 6.13e-20 98 24 9 360 1 pedH Quinoprotein alcohol dehydrogenase PedH Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q88JH0 0.000368 47 31 1 69 1 pedH Quinoprotein alcohol dehydrogenase PedH Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
A0A3F2YLY8 8.21e-20 97 25 13 397 1 xoxF Lanthanide-dependent methanol dehydrogenase XoxF Methylotuvimicrobium buryatense
A8R3S4 3.08e-18 93 22 14 477 1 qedA Quinoprotein ethanol dehydrogenase Pseudomonas putida
P29968 7.48e-18 91 23 27 644 3 xoxF Putative dehydrogenase XoxF Paracoccus denitrificans
P12293 6.54e-17 89 25 17 420 1 moxF Methanol dehydrogenase [cytochrome c] subunit 1 Paracoccus denitrificans
P12293 1.44e-05 52 42 1 61 1 moxF Methanol dehydrogenase [cytochrome c] subunit 1 Paracoccus denitrificans
I0JWN7 1.37e-16 87 22 13 411 1 xoxF Lanthanide-dependent methanol dehydrogenase Methylacidiphilum fumariolicum (strain SolV)
P15279 1.54e-13 78 24 17 392 1 moxF Methanol dehydrogenase [cytochrome c] subunit 1 Methylobacterium organophilum
P15279 2.8e-05 51 39 1 61 1 moxF Methanol dehydrogenase [cytochrome c] subunit 1 Methylobacterium organophilum
Q9AGW3 4.56e-13 76 23 13 382 1 boh 1-butanol dehydrogenase (quinone) Thauera butanivorans (strain ATCC 43655 / DSM 2080 / JCM 20651 / NBRC 103042 / IAM 12574 / Bu B1211)
Q9AGW3 1.35e-06 55 39 1 69 1 boh 1-butanol dehydrogenase (quinone) Thauera butanivorans (strain ATCC 43655 / DSM 2080 / JCM 20651 / NBRC 103042 / IAM 12574 / Bu B1211)
C5B120 2.61e-12 73 24 14 377 1 xoxF1 Lanthanide-dependent methanol dehydrogenase Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
P16027 4.33e-12 73 22 14 388 1 moxF Methanol dehydrogenase [cytochrome c] subunit 1 Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
P16027 3.59e-05 51 39 1 61 1 moxF Methanol dehydrogenase [cytochrome c] subunit 1 Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
P38539 2.88e-11 70 23 16 402 1 None Methanol dehydrogenase [cytochrome c] subunit 1 Methylophilus methylotrophus
P38539 2.41e-06 54 42 1 61 1 None Methanol dehydrogenase [cytochrome c] subunit 1 Methylophilus methylotrophus
Q934G0 6.02e-10 66 20 23 646 1 luh Lupanine 17-hydroxylase [cytochrome c] Pseudomonas sp.
Q70JP0 0.000512 44 28 0 90 3 sldB Glycerol dehydrogenase small subunit Gluconobacter oxydans (strain 621H)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08695
Feature type CDS
Gene -
Product membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
Location 1902531 - 1904930 (strand: 1)
Length 2400 (nucleotides) / 799 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4482
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF01011 PQQ enzyme repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4993 Carbohydrate transport and metabolism (G) G Glucose dehydrogenase, PQQ-dependent

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Pentose phosphate pathway
Metabolic pathways
Biosynthesis of secondary metabolites		 -

Protein Sequence

MKISHFYRWIVFIILTILALYFTVLGGYLVSLAGSPFYLFTGVMLLIIAACFLSRKKSTLLLFNFLFLITIVWSIWESGFDFWALAPRLDIIFILGLLLIPFTLNNNVYTCRTNKIGLFTLLATTLIIILGSSLTDPHAINGQFTQQQPTNSISPIGVNDNDWPAYGRTQAGIRYSPLTQINSDNVDKLVEKWTFHTGDEKRANDAVEITNEVTPIKIEDNLFLCTPHQYLISLDPATGKEKWRFDSKLQYNKSFQHMTCRGVAYYNQNNSAEFAKSLDVRQPSISDECPEKVFLPVNDGRLIAVNAQTGNACRDFGQNGEINLLASMPYAYLGGYNPTSPPIVTGNTIIIGGSVTDNLSTQEPSGVIRGYDVNSGKLIWVFDTGAEDPNAMPGKETQFVHNSPNAWAPLAYDAQTDVVYIPTGVGTPDIWGGDRHPLKERYANSVLALKGSTGELLWHFQTTHHDLWDMDVPSQPSLVDIKTDKNETIPAIYIVTKTGNVFVLDRRDGTPIVPVTEKPVPTSVKYGPQTQGEHYSPTQPFSALNLAPKNKLQGSDMWGGTMADQLLCRIAFHQLNYEGIYTPPSENGTLVFPGNLGIFEWGGISVNQDRQVAVMNFITLPFISKLYLKDPQDSQAIDAGHGEQGLQPMTGTPYSVDIHPFLSPLGLPCKQPPWGLVAGVDLTKNELVWQQRFGTIRDSLPNLVELPPLKIGVPGLGGAISTAGNVMFVAASQDNYIRAFNVTNGKMLWEARLPAGGQATPMTYSIGGKQYVVIMAGGHGSFGTKMGDNLVAYGLPDNL

Flanking regions ( +/- flanking 50bp)

ATTGTCTATTCTATTTATAAGATGGTAAGAAAGAATAGGACGATAGCATTATGAAAATATCACATTTCTATCGATGGATAGTATTCATCATACTCACAATATTGGCGCTTTACTTTACTGTACTCGGAGGGTATTTAGTTTCATTAGCAGGATCGCCTTTTTATCTCTTTACCGGTGTCATGCTTCTTATTATTGCAGCTTGCTTTCTAAGTCGAAAGAAAAGCACCCTATTACTCTTTAACTTTCTATTTTTAATAACGATTGTCTGGAGTATCTGGGAGTCAGGATTTGATTTTTGGGCACTCGCTCCTCGCTTAGATATTATTTTTATTCTAGGCTTACTCCTTATTCCTTTCACACTCAATAATAATGTTTACACTTGTCGTACCAATAAAATTGGCTTATTCACACTATTAGCCACAACACTTATCATTATATTAGGTAGTTCACTAACCGATCCTCATGCCATTAATGGTCAATTTACACAACAACAGCCCACCAACTCTATATCTCCTATCGGAGTAAATGATAATGACTGGCCCGCTTATGGCAGAACGCAAGCCGGAATACGCTATTCACCATTAACTCAAATCAACAGTGATAATGTTGATAAGTTAGTTGAGAAATGGACTTTTCATACCGGTGATGAAAAAAGAGCTAATGATGCCGTTGAGATAACCAACGAAGTTACGCCTATAAAAATTGAAGATAATCTCTTTCTATGTACACCTCACCAATATTTAATTAGCTTAGATCCCGCAACAGGTAAAGAGAAGTGGCGTTTTGATTCTAAATTGCAATATAACAAAAGCTTCCAGCATATGACTTGCCGAGGGGTTGCCTATTATAATCAAAATAATAGTGCCGAATTTGCCAAAAGCCTCGACGTTCGCCAACCAAGCATATCAGATGAATGTCCTGAAAAAGTCTTTCTTCCAGTCAATGATGGCCGCCTAATCGCAGTTAATGCGCAAACGGGTAATGCATGCCGTGATTTTGGTCAGAATGGAGAAATCAATCTGTTAGCTTCTATGCCTTATGCTTATTTGGGTGGATATAACCCAACATCTCCCCCTATCGTCACCGGTAATACTATTATTATAGGTGGCTCTGTTACTGATAACTTATCAACTCAAGAGCCTTCTGGTGTGATCCGTGGCTATGATGTTAATAGCGGAAAATTAATATGGGTATTTGATACTGGCGCAGAAGATCCCAATGCGATGCCAGGTAAAGAGACTCAATTTGTTCATAACTCTCCTAATGCATGGGCGCCTTTAGCTTATGATGCACAAACGGATGTGGTCTATATTCCGACAGGAGTAGGTACACCCGATATTTGGGGAGGCGATCGTCATCCATTAAAAGAGCGTTACGCTAATTCAGTTTTAGCACTAAAAGGGTCGACAGGCGAGCTATTGTGGCATTTCCAAACCACCCATCATGATTTATGGGATATGGATGTACCTTCGCAACCATCACTGGTTGATATCAAAACTGATAAAAATGAAACAATACCTGCCATTTATATCGTCACGAAAACAGGGAATGTGTTTGTTCTTGATAGAAGAGACGGTACACCTATTGTTCCCGTAACAGAAAAACCCGTTCCTACCAGTGTCAAATATGGTCCACAAACACAAGGTGAGCATTACTCACCCACTCAGCCTTTTTCAGCACTTAATTTAGCACCTAAAAATAAGTTGCAAGGTTCAGATATGTGGGGCGGCACAATGGCAGATCAGCTGTTATGTCGTATCGCTTTCCATCAGTTAAATTATGAGGGAATTTATACACCACCATCAGAAAACGGTACGCTTGTTTTTCCTGGTAACCTCGGTATTTTTGAATGGGGCGGTATTTCTGTTAATCAAGATAGACAAGTCGCGGTAATGAACTTTATTACCTTGCCTTTTATCTCAAAACTTTATTTAAAAGATCCTCAAGATAGTCAAGCAATTGACGCAGGCCACGGAGAGCAAGGTTTACAACCCATGACGGGAACACCTTATAGTGTTGATATTCATCCATTCTTATCACCACTAGGATTACCTTGTAAACAACCCCCTTGGGGACTTGTTGCTGGTGTTGATTTAACAAAAAATGAGCTTGTTTGGCAACAACGATTTGGCACCATTAGGGATAGTTTGCCTAATTTAGTGGAATTACCACCATTAAAAATTGGTGTTCCTGGGCTAGGAGGCGCTATCTCAACCGCAGGTAATGTGATGTTTGTTGCTGCTTCTCAGGATAATTATATTCGAGCATTTAATGTGACGAATGGCAAAATGTTATGGGAAGCACGATTACCCGCAGGTGGACAAGCAACGCCAATGACCTACTCTATTGGAGGCAAGCAATATGTGGTCATTATGGCCGGCGGACATGGTTCATTTGGTACTAAAATGGGCGATAACTTAGTGGCCTATGGGTTACCTGATAATTTATAGCTTTAAATTATCAATAATATCAGGCGATTGTTATTTTCAATCGCCTTTTT