Homologs in group_375

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14100 FBDBKF_14100 24.2 Morganella morganii S1 - Alpha-xenorhabdolysin family binary toxin subunit B
EHELCC_08180 EHELCC_08180 24.2 Morganella morganii S2 - Alpha-xenorhabdolysin family binary toxin subunit B
NLDBIP_08505 NLDBIP_08505 24.2 Morganella morganii S4 - Alpha-xenorhabdolysin family binary toxin subunit B
LHKJJB_05760 LHKJJB_05760 24.2 Morganella morganii S3 - Alpha-xenorhabdolysin family binary toxin subunit B
HKOGLL_05155 HKOGLL_05155 24.2 Morganella morganii S5 - Alpha-xenorhabdolysin family binary toxin subunit B
F4V73_RS02835 F4V73_RS02835 24.5 Morganella psychrotolerans - alpha-xenorhabdolysin family binary toxin subunit B
F4V73_RS07225 F4V73_RS07225 20.2 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_375

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_375

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08580
Feature type CDS
Gene -
Product alpha-xenorhabdolysin family binary toxin subunit B
Location 1872321 - 1873328 (strand: 1)
Length 1008 (nucleotides) / 335 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_375
Orthogroup size 8
N. genomes 7

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Genomic region

Protein Sequence

MNSVTSQLQEFDCNQFFHTIKSIRKITSELFEHDNILNHNLITISINNNKIYDEIIIFSILLKSRLNQKLLTGIFKNINEINHAMADRELTQQLSEKLLQEKMFIEQLFKDELTESIEIIEKHISFINDKKQLLTTTTIISEIDKLIRNKEEISIEINEKIAKQKLSINEIKEQLDIITKSEDIIYNKNILDFFTSHLPSKQTISKLQLASSEKDILSVFIDLLKQFFTHLEKGFSYQKLVETRHTLIDNYLIQIKNLTKLEQKKQALLFTLSRYYAVTEINQYIDMLNQQLSLLEQYWHTLIEQLIQLKRNLSEAKTVLSPHLVFLNHFSHHYQ

Flanking regions ( +/- flanking 50bp)

GATGAAGCTTTATCCTCTTTTTATTCATCTAAATAACAAAAGGAAATGTTATGAATAGCGTAACTTCGCAATTACAGGAATTTGATTGCAATCAATTTTTCCATACTATTAAATCAATTAGAAAAATAACTTCTGAACTATTTGAACATGATAATATCTTAAATCATAATCTTATTACCATATCAATAAACAATAATAAAATTTATGATGAAATAATTATTTTCTCTATTCTGCTAAAAAGCCGGCTAAACCAGAAATTGTTAACAGGGATATTTAAAAATATTAATGAAATTAATCATGCAATGGCTGATAGAGAGTTAACACAGCAATTATCAGAAAAACTGCTCCAAGAGAAAATGTTTATTGAGCAGTTATTTAAAGATGAATTAACTGAATCTATAGAAATTATAGAAAAGCACATCAGTTTTATTAATGATAAAAAACAGCTCTTAACAACCACCACTATTATTAGTGAAATAGATAAATTAATTAGAAATAAAGAAGAAATATCTATTGAAATCAATGAGAAAATAGCCAAGCAAAAGTTATCGATTAATGAAATTAAAGAACAACTCGATATAATTACTAAAAGTGAAGATATTATTTATAATAAAAATATCCTCGATTTTTTTACCTCTCACCTGCCAAGTAAACAGACAATTTCTAAACTGCAGTTGGCTTCTTCAGAAAAAGATATTCTCTCTGTTTTTATCGATCTGCTAAAGCAATTTTTTACCCATCTGGAGAAAGGGTTTTCTTACCAAAAACTGGTAGAGACACGTCATACTCTTATTGATAACTATTTGATACAGATAAAAAATCTAACCAAACTAGAACAGAAAAAACAAGCTCTCTTATTTACCCTAAGTCGTTATTATGCAGTCACAGAAATCAATCAATATATTGATATGTTAAATCAACAATTATCGCTATTAGAGCAGTATTGGCATACATTAATAGAGCAACTGATACAATTAAAACGCAATCTTTCCGAGGCAAAAACCGTGCTCTCACCTCATCTTGTATTCCTTAATCACTTTTCACACCATTATCAATAATATTTTCACTAGCCAGACATCATAACCCCCTTAAAACAGGGGGTATGATT