Homologs in group_3893

Help

1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS07515 PMI_RS07515 33.3 Proteus mirabilis HI4320 - nucleotidyltransferase domain-containing protein

Distribution of the homologs in the orthogroup group_3893

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3893

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07510
Feature type CDS
Gene -
Product nucleotidyltransferase domain-containing protein
Location 1635950 - 1637002 (strand: -1)
Length 1053 (nucleotides) / 350 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3893
Orthogroup size 2
N. genomes 1

Actions

Genomic region

Domains

PF10127 RNA repair pathway DNA polymerase beta family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3541 General function prediction only (R) R Predicted nucleotidyltransferase YcgL

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07074 uncharacterized protein - -

Protein Sequence

MKLTIDNIKPYLLFETISGSRSQNLATDSSDTDIKGVFYLPKEMFYCSDYVPQVSNKTNDIVYYELGRFVELLCASNPNILELLNAPEHVVIYRHPLFMQFNPEWFLSKECVQTFVHYAQGQIKKAQGLNKKIMDPIDKELKTILDFCYIIENGKSLLLNNWLKKRCWEQQNIGLVKINHAQNLYAVFYDPNSDYQGVIKKDNATDVLLSSVSETAILQAYLSFNKDGYSTYCKQYHAYWQWVEERNEARYQQNIEHGRSYDSKNMMHTFRLLYIALGIATEKKVKVWCDNRDELLEIKSGALSYETLFERSKILIEKIEQAFQQSQLPEKINPQLIKQVLVNIRKELYQ

Flanking regions ( +/- flanking 50bp)

CACCGTACCAGATAGTGAAATATTAAATAATTGGTTTAGGAAAATACTTGATGAAACTGACCATTGACAATATAAAGCCTTACCTTTTATTTGAAACAATTTCAGGTAGTCGTTCACAAAATTTGGCAACAGATAGTTCAGATACTGATATTAAAGGTGTTTTTTATCTACCTAAAGAGATGTTTTATTGCTCTGATTATGTGCCACAAGTAAGTAATAAAACTAATGATATCGTTTATTATGAATTAGGGCGATTTGTTGAATTACTGTGTGCGTCTAATCCTAATATTTTAGAATTATTAAATGCACCAGAGCATGTTGTTATTTATCGTCATCCATTATTTATGCAATTTAACCCAGAATGGTTTTTATCAAAGGAATGCGTACAGACTTTTGTGCATTATGCTCAAGGGCAAATAAAAAAAGCGCAAGGGTTAAATAAGAAAATCATGGATCCTATAGATAAAGAGTTAAAAACGATCCTTGATTTCTGTTATATCATTGAAAATGGAAAAAGCCTATTACTGAATAATTGGCTTAAAAAACGTTGTTGGGAGCAGCAAAATATTGGGTTGGTTAAAATCAATCATGCACAAAATCTTTATGCAGTTTTTTATGATCCAAATAGTGATTATCAAGGCGTAATAAAAAAAGATAATGCCACCGATGTTTTACTAAGCAGTGTCTCTGAAACAGCCATATTACAAGCCTATCTTAGTTTTAATAAAGACGGCTACAGTACCTATTGCAAGCAGTATCATGCTTATTGGCAATGGGTTGAGGAGCGTAATGAAGCCCGCTATCAGCAAAATATTGAACATGGACGAAGTTACGATAGTAAAAATATGATGCACACTTTTAGGTTGCTTTATATTGCATTAGGAATTGCCACTGAAAAAAAAGTCAAAGTTTGGTGTGATAACAGGGATGAATTGTTAGAAATTAAATCTGGGGCTTTAAGTTATGAAACATTATTTGAGCGAAGTAAAATATTAATAGAAAAAATTGAGCAAGCTTTTCAACAAAGTCAATTACCAGAAAAAATCAATCCTCAATTAATTAAGCAAGTATTAGTGAATATTCGTAAAGAATTATATCAATAATAGAATACTATTATCCCTTACAAGGTTGTAAGGGATAAACTATTAGTTAT