Homologs in group_1841

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13745 FBDBKF_13745 32.3 Morganella morganii S1 - DUF4878 domain-containing protein
EHELCC_11415 EHELCC_11415 32.3 Morganella morganii S2 - DUF4878 domain-containing protein
NLDBIP_11760 NLDBIP_11760 32.3 Morganella morganii S4 - DUF4878 domain-containing protein
LHKJJB_11620 LHKJJB_11620 32.3 Morganella morganii S3 - DUF4878 domain-containing protein
HKOGLL_10230 HKOGLL_10230 32.3 Morganella morganii S5 - DUF4878 domain-containing protein
F4V73_RS12615 F4V73_RS12615 32.3 Morganella psychrotolerans - DUF4878 domain-containing protein

Distribution of the homologs in the orthogroup group_1841

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1841

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07465
Feature type CDS
Gene -
Product DUF4878 domain-containing protein
Location 1628785 - 1629192 (strand: -1)
Length 408 (nucleotides) / 135 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1841
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF12870 Domain of unknown function (DUF4878)

Protein Sequence

MLKKMMGFMFLAVAMMTLSACGDKQDEAGKAAVEFIEAVASGDGDKAVSLMYFGDLEKDPMAEQITGKFKMIVAEAGKKIKEQGGLGKVEVAKVEYSEDKNKAVVTLKTVLKNGEEKTENQNMIKVDGKWKVEVK

Flanking regions ( +/- flanking 50bp)

TATAAGATGCTTATTGTATTAAATTAAATATTTATGGTGATGGTGAATTTATGTTAAAGAAAATGATGGGATTTATGTTTCTTGCGGTGGCAATGATGACATTATCTGCATGTGGTGATAAACAAGACGAAGCAGGAAAAGCCGCGGTTGAATTTATTGAAGCTGTCGCTTCCGGTGATGGTGATAAGGCTGTGTCATTAATGTATTTTGGTGATTTAGAAAAAGATCCAATGGCAGAGCAAATTACCGGCAAATTTAAAATGATCGTTGCCGAAGCGGGCAAAAAAATTAAAGAGCAAGGTGGCTTGGGTAAGGTTGAAGTAGCAAAAGTTGAATACAGCGAAGATAAAAATAAAGCCGTTGTCACACTCAAAACAGTGTTGAAAAATGGTGAAGAAAAAACAGAAAATCAAAATATGATCAAAGTTGATGGCAAATGGAAAGTTGAAGTTAAGTGATAATACGCTTTACTCTTGCATTAACTTTATACTTAGCGAGCACATTGACT