Homologs in group_239

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01810 FBDBKF_01810 82.4 Morganella morganii S1 appC Cytochrome bd-type quinol oxidase, subunit 1
EHELCC_02280 EHELCC_02280 82.4 Morganella morganii S2 appC Cytochrome bd-type quinol oxidase, subunit 1
NLDBIP_01180 NLDBIP_01180 82.4 Morganella morganii S4 appC Cytochrome bd-type quinol oxidase, subunit 1
LHKJJB_00855 LHKJJB_00855 82.4 Morganella morganii S3 appC Cytochrome bd-type quinol oxidase, subunit 1
HKOGLL_00895 HKOGLL_00895 82.4 Morganella morganii S5 appC Cytochrome bd-type quinol oxidase, subunit 1
F4V73_RS04135 F4V73_RS04135 81.5 Morganella psychrotolerans - cytochrome ubiquinol oxidase subunit I
PMI_RS11760 PMI_RS11760 76.1 Proteus mirabilis HI4320 - cytochrome ubiquinol oxidase subunit I

Distribution of the homologs in the orthogroup group_239

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_239

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P94364 1.35e-86 275 36 5 447 3 cydA Cytochrome bd ubiquinol oxidase subunit 1 Bacillus subtilis (strain 168)
Q09049 2.09e-70 235 29 6 513 3 cydA Cytochrome bd ubiquinol oxidase subunit 1 Azotobacter vinelandii
P26459 5.53e-69 230 38 5 315 1 appC Cytochrome bd-II ubiquinol oxidase subunit 1 Escherichia coli (strain K12)
P26459 2.43e-09 62 37 2 127 1 appC Cytochrome bd-II ubiquinol oxidase subunit 1 Escherichia coli (strain K12)
P45021 2.63e-68 229 38 3 311 3 HI_1076 Probable cytochrome oxidase subunit 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45021 2.64e-06 53 28 2 149 3 HI_1076 Probable cytochrome oxidase subunit 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0ABK1 1.11e-67 227 29 9 510 3 cydA Cytochrome bd-I ubiquinol oxidase subunit 1 Shigella flexneri
P0ABJ9 1.11e-67 227 29 9 510 1 cydA Cytochrome bd-I ubiquinol oxidase subunit 1 Escherichia coli (strain K12)
P0ABK0 1.11e-67 227 29 9 510 3 cydA Cytochrome bd-I ubiquinol oxidase subunit 1 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
C0SP90 1.65e-56 196 30 6 441 1 ythA Putative cytochrome bd menaquinol oxidase subunit I Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06940
Feature type CDS
Gene -
Product cytochrome ubiquinol oxidase subunit I
Location 1518398 - 1519732 (strand: 1)
Length 1335 (nucleotides) / 444 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_239
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01654 Cytochrome bd terminal oxidase subunit I

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1271 Energy production and conversion (C) C Cytochrome bd-type quinol oxidase, subunit 1

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00425 cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] Oxidative phosphorylation
Two-component system		 Cytochrome bd ubiquinol oxidase

Protein Sequence

MFGLSAFDLARIQFAFTVSFHIIFPAITIGLASFLAVLEGLWLKTRNKDYLALFHFWSKIFAVNFAMGVVSGLVMAYQFGTNWSFFSDFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWNKVGEKLHFFATCMVALGTLMSTFWILASNSWMQTPQGFEIVNNQVVPVDWLAVIFNPSFPYRLAHMGVAAFLASAFFIAASASWHLLKGNKTSAMKKMLSMSIWIILILAPIQALIGDMHGLNTLKHQPAKIAAIEGHWQNNPGEATPLILFGIPDMDEEKTKYALQIPYLGSLILTHSLDKQVPALKEFPKDDRPNSLIVFWSFRIMVGLGMLMILVGVWGTWLRYKKKLYQSNLFLRFTFLMAPSGLIAILAGWFTTEVGRQPWVVYGIQRTRDAVSAHGEMHMSISLLIFFIVYGSVFGIGYAYMLKLIRKGAPEVQDGN

Flanking regions ( +/- flanking 50bp)

TGCTATTTACAGATCAGCGCGATTTGTATATCAAAATAATGAGGTTGTTTATGTTTGGGTTAAGTGCCTTTGATTTGGCGCGTATCCAATTTGCGTTTACCGTTTCTTTCCATATTATCTTCCCCGCAATTACTATAGGGCTAGCCAGCTTCTTAGCTGTCTTGGAAGGCTTATGGCTAAAAACTCGCAATAAGGATTATTTAGCGCTATTCCATTTTTGGTCAAAAATATTCGCTGTTAACTTTGCTATGGGCGTCGTCTCTGGTCTCGTTATGGCATATCAGTTCGGTACTAATTGGAGCTTTTTCTCCGATTTTGCCGGCTCTATCACCGGCCCTTTATTGACTTATGAAGTACTTACAGCATTCTTCTTAGAAGCTGGATTTCTAGGTGTGATGTTATTTGGCTGGAACAAAGTAGGTGAAAAATTACACTTTTTCGCCACTTGCATGGTGGCATTGGGTACATTAATGTCAACATTTTGGATTTTAGCCTCCAACAGTTGGATGCAAACACCACAGGGATTCGAAATCGTCAACAATCAAGTAGTTCCCGTTGATTGGCTAGCGGTTATTTTTAATCCTTCCTTCCCTTATCGTCTTGCTCATATGGGCGTTGCTGCATTTCTTGCTTCGGCATTCTTTATTGCCGCCTCGGCTTCATGGCATTTATTAAAAGGCAACAAGACCTCTGCAATGAAGAAGATGCTCTCGATGTCTATATGGATTATCTTAATCTTAGCGCCTATTCAAGCACTTATTGGTGATATGCATGGTTTAAATACGTTAAAACATCAACCCGCCAAAATTGCCGCGATTGAAGGGCATTGGCAAAATAATCCTGGTGAGGCTACACCGTTAATTCTATTTGGTATACCGGATATGGATGAAGAAAAAACCAAATATGCCCTTCAAATTCCTTATTTAGGTAGCCTGATATTAACTCATAGTTTAGATAAACAAGTACCAGCACTAAAAGAATTTCCTAAAGATGATAGGCCAAATTCACTGATTGTTTTTTGGTCATTTCGTATTATGGTCGGCCTTGGCATGCTGATGATTTTAGTGGGTGTATGGGGCACATGGTTACGTTATAAGAAAAAATTATATCAATCTAACCTCTTCTTGCGATTCACTTTTCTAATGGCTCCTTCAGGATTAATTGCCATTTTAGCGGGTTGGTTTACTACAGAAGTAGGTCGACAACCTTGGGTTGTGTATGGGATACAACGAACACGTGATGCGGTATCTGCTCATGGTGAAATGCATATGAGCATTAGCCTACTGATTTTCTTTATCGTTTATGGATCTGTATTCGGAATTGGATATGCCTATATGTTAAAACTTATCCGCAAAGGTGCGCCGGAGGTTCAAGATGGGAATTGATTTACCCGTTATTTGGTTCATCATCATCGTATTTAGCACATTAATGTATA