Homologs in group_3696

Help

3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS02015 PMI_RS02015 22.1 Proteus mirabilis HI4320 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
PMI_RS06900 PMI_RS06900 38.3 Proteus mirabilis HI4320 - TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
PMI_RS07535 PMI_RS07535 20.4 Proteus mirabilis HI4320 - TonB-dependent receptor

Distribution of the homologs in the orthogroup group_3696

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3696

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31499 5.77e-110 352 31 19 752 2 hemR Hemin receptor Yersinia enterocolitica
Q56989 4.93e-108 347 31 21 750 3 hmuR Hemin receptor Yersinia pestis
Q7VNU1 6.41e-27 120 21 24 753 2 tdhA TonB-dependent heme receptor A Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q4QP67 9.72e-25 114 22 26 784 3 tdhA TonB-dependent heme receptor A Haemophilus influenzae (strain 86-028NP)
P44523 2.57e-23 109 22 24 782 3 tdhA TonB-dependent heme receptor A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44600 5.58e-14 79 23 17 475 1 hxuC Heme/hemopexin utilization protein C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44600 3.6e-10 67 29 3 174 1 hxuC Heme/hemopexin utilization protein C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q4QNS6 1.41e-13 78 23 18 477 3 hxuC Heme/hemopexin utilization protein C Haemophilus influenzae (strain 86-028NP)
Q4QNS6 3.1e-10 67 29 3 174 3 hxuC Heme/hemopexin utilization protein C Haemophilus influenzae (strain 86-028NP)
P45357 1.92e-13 77 23 17 473 3 hxuC Heme/hemopexin utilization protein C Haemophilus influenzae
P45357 4.03e-10 67 28 3 174 3 hxuC Heme/hemopexin utilization protein C Haemophilus influenzae
P44970 3.63e-13 77 26 5 208 3 tbpA Transferrin-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q47952 2.02e-11 71 26 7 219 1 hgbA Hemoglobin and hemoglobin-haptoglobin-binding protein Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q09056 5.74e-10 66 26 6 233 1 tbp1 Transferrin-binding protein A Neisseria meningitidis serogroup B
Q57408 7.88e-10 66 28 4 176 3 HI_1565/HI_1567 Probable hemoglobin and hemoglobin-haptoglobin-binding protein 4 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9K0U9 8.97e-10 66 25 6 233 1 tbp1 Transferrin-binding protein A Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q48153 3.42e-09 64 26 2 168 3 hhuA Hemoglobin-haptoglobin-binding protein A Haemophilus influenzae
Q8DD41 4.79e-09 63 27 7 201 3 btuB Vitamin B12 transporter BtuB Vibrio vulnificus (strain CMCP6)
Q01996 6.75e-09 63 26 6 228 3 tbpA Transferrin-binding protein A Neisseria gonorrhoeae
Q06987 2.69e-08 61 25 6 233 1 tbp1 Transferrin-binding protein A Neisseria meningitidis serogroup B
Q06379 3.67e-08 60 24 8 291 2 lbpA Lactoferrin-binding protein A Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JWA2 1.29e-07 58 29 4 174 3 hpuB Hemoglobin-haptoglobin utilization protein B Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P96949 1.54e-07 58 31 3 150 3 hpuB Hemoglobin-haptoglobin utilization protein B Neisseria meningitidis serogroup C
Q9JTK4 1.75e-07 58 26 2 179 3 lbpA Lactoferrin-binding protein A Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q9ZA21 1.86e-07 58 25 2 168 1 hgpA Hemoglobin and hemoglobin-haptoglobin-binding protein A Haemophilus influenzae
Q9ZA21 0.000261 48 29 6 137 1 hgpA Hemoglobin and hemoglobin-haptoglobin-binding protein A Haemophilus influenzae
Q7MQ42 2.19e-07 58 27 5 166 3 btuB Vitamin B12 transporter BtuB Vibrio vulnificus (strain YJ016)
Q9X442 1.16e-06 56 30 1 124 3 hgpC Hemoglobin and hemoglobin-haptoglobin-binding protein C Haemophilus influenzae
Q9KIV1 1.38e-06 55 27 3 185 3 hgbB Hemoglobin and hemoglobin-haptoglobin-binding protein B Haemophilus influenzae
P44795 2.25e-06 55 30 1 124 1 HI_0635 Probable hemoglobin and hemoglobin-haptoglobin-binding protein 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44836 2.28e-06 55 30 1 124 1 HI_0712 Probable hemoglobin and hemoglobin-haptoglobin-binding protein 3 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0C6R0 8.87e-06 52 26 4 190 3 irgA Iron-regulated outer membrane virulence protein Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F9G0 1.02e-05 52 26 4 190 3 irgA Iron-regulated outer membrane virulence protein Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P44809 0.000219 48 22 2 167 1 HI_0661 Probable hemoglobin and hemoglobin-haptoglobin-binding protein 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q47162 0.000342 47 20 12 338 3 fct Ferrichrysobactin receptor Dickeya dadantii (strain 3937)
Q6LLU3 0.000585 47 21 6 228 3 btuB Vitamin B12 transporter BtuB Photobacterium profundum (strain SS9)
Q8YZR0 0.000657 47 31 8 144 1 schT Schizokinen transporter SchT Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
O87296 0.000753 47 22 2 167 3 hgpB Hemoglobin and hemoglobin-haptoglobin-binding protein B Haemophilus influenzae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06895
Feature type CDS
Gene -
Product TonB-dependent receptor
Location 1507335 - 1509569 (strand: 1)
Length 2235 (nucleotides) / 744 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3696
Orthogroup size 4
N. genomes 1

Actions

Genomic region

Domains

PF00593 TonB dependent receptor-like, beta-barrel
PF07715 TonB-dependent Receptor Plug Domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4771 Inorganic ion transport and metabolism (P) P Outer membrane receptor for ferrienterochelin and colicins

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K16087 hemoglobin/transferrin/lactoferrin receptor protein - -

Protein Sequence

MDINGMSMLKRNFKYSTLATAICLLYAPTTFAHIEKVETDTLTVIGQQDNQITDFQSVVDTRSAQAQTASTTGQLLKQIPGITVSGTGITNGGNIMMRGYDQRGVKIFVDGIHQPIDNTMNKLGGLFIEPSLISRVKVKHGGSSVKHGSGALGGVVSFSTLHPNELLDANKNLGAKLFSSFSSADKHFSYGGVIAGRHQLVEGLLAYSQRERGPIRIADDSILNNHERIKNYFAKAYVYPTEEQTVIFSARQYNNAGEQREVLNRMGGFGKRDSNNMYRATKQNDISLTYHLNPNNYDWLDLSTQLYYSQFKIAHTFLTDTRKEIYPDIESVLGNSEKRTQYTYGMKVENAFNLNYFQDRLTQSVIIGIDAEKQKMVSNNKAKNFPLSHMDNASGWVHNTFNTPLLPITLIAGLRYNYYQNVPDNSKTLDYYKDLNKKGDMTSADKYQETYQNISKNIALRLTLTKWLQIYSSYSVAFRAPTLSEMYNDSVHFTIISPFNKKSYDARWVPNSTLEPETNRTWEHGINLQKNALIFTNDQINIKASYYSTESIDHITYQQWYHSRKPIQLKNSHIALSPIKDAREPLLFQSVNLPKALIHGFDLRLLYSHPYIAMGVNYNQTKTLELSSLETISMVRPETLTAFINVPIIKTPFSVAWSGKFAGPTAKKGTHKYPGSEEVTTRLKEDLQQYPGYGVHSFAVNYQSNNKDIQASLVLDNAFNKVYYSTVGVPQEARNIKMSVSYRW

Flanking regions ( +/- flanking 50bp)

ACCTATTTTGCTAGGCAGCCAGCTAATTCACTCCATATACAAGGACTTTTATGGATATTAATGGTATGTCTATGCTGAAAAGAAATTTCAAATACTCCACATTAGCTACAGCAATTTGTCTGTTATACGCGCCGACTACTTTTGCTCATATTGAAAAAGTAGAGACAGATACATTGACTGTTATTGGGCAACAAGACAATCAAATAACGGATTTTCAATCTGTCGTCGATACCCGTTCAGCACAAGCTCAAACCGCATCTACCACGGGACAATTGTTAAAACAAATCCCGGGGATCACCGTATCAGGGACGGGGATCACCAATGGTGGCAATATTATGATGCGTGGTTACGATCAAAGAGGTGTCAAAATCTTTGTGGATGGTATTCATCAACCTATTGATAATACTATGAACAAGCTTGGTGGCCTTTTTATTGAACCTTCACTTATTTCGCGCGTTAAAGTCAAACATGGTGGCTCTTCGGTTAAACATGGAAGTGGCGCGCTAGGTGGCGTTGTTTCGTTCTCAACTCTCCATCCAAATGAGTTATTAGACGCCAATAAAAACCTTGGTGCTAAATTATTTAGCTCATTCTCTTCTGCGGATAAACATTTTTCTTATGGTGGTGTGATCGCAGGTAGACATCAGTTAGTGGAAGGGTTATTGGCTTATAGCCAAAGAGAGCGTGGCCCGATACGTATTGCTGATGACTCAATATTAAATAACCACGAACGTATCAAAAATTATTTTGCAAAAGCCTATGTTTACCCTACAGAGGAACAAACCGTTATTTTTTCTGCCCGTCAATATAATAATGCAGGAGAGCAAAGAGAAGTTTTAAATCGAATGGGAGGGTTTGGAAAAAGAGACAGTAATAATATGTATCGAGCCACCAAACAAAATGATATCTCACTCACCTATCATTTAAATCCAAATAATTATGATTGGCTCGATCTGAGCACTCAACTTTATTATTCTCAGTTTAAAATTGCGCATACGTTTCTGACGGATACACGCAAAGAAATATATCCAGACATAGAAAGTGTGCTAGGTAATTCTGAAAAACGTACCCAATATACCTATGGTATGAAAGTAGAAAACGCCTTTAATTTAAATTACTTTCAAGATAGGTTGACTCAATCTGTGATTATCGGCATTGATGCTGAAAAACAGAAGATGGTATCGAATAATAAGGCTAAAAATTTCCCTTTATCACATATGGATAATGCCTCAGGTTGGGTTCATAACACGTTCAATACCCCTCTATTACCCATTACTTTAATTGCGGGTCTTCGTTACAACTATTATCAAAATGTCCCTGATAACAGTAAAACTTTAGATTACTACAAAGACTTAAATAAAAAAGGAGACATGACCTCCGCCGACAAATATCAAGAAACATATCAAAATATTTCTAAAAATATTGCGTTACGTCTCACACTGACCAAATGGTTACAGATCTATTCTTCTTATTCTGTTGCCTTTAGGGCGCCGACTTTAAGCGAAATGTATAATGACTCAGTACATTTCACTATAATTTCCCCTTTTAATAAGAAAAGCTATGATGCTCGTTGGGTTCCAAATTCCACATTAGAACCAGAGACGAATAGAACATGGGAACATGGTATCAATTTACAAAAAAATGCGTTGATTTTTACCAATGACCAGATAAACATTAAAGCTTCATATTACAGCACTGAATCGATTGACCACATTACTTATCAACAGTGGTATCATAGTCGTAAGCCTATCCAATTAAAAAATAGTCATATTGCGTTATCTCCCATTAAAGATGCTCGTGAACCTTTATTATTTCAATCAGTTAACTTGCCTAAAGCGCTTATTCACGGCTTTGATTTAAGATTGCTATATTCTCATCCATACATCGCTATGGGGGTAAATTACAATCAAACTAAAACCTTGGAACTGTCGTCTCTAGAGACTATTTCAATGGTGCGCCCTGAAACATTAACCGCTTTTATAAATGTACCCATTATCAAAACACCATTTTCTGTTGCTTGGTCAGGAAAGTTTGCCGGTCCAACGGCCAAAAAAGGCACACATAAATACCCTGGTTCAGAGGAAGTGACTACTCGATTAAAAGAAGATCTTCAGCAATACCCTGGCTATGGTGTGCATAGTTTTGCAGTCAACTATCAATCCAATAATAAAGATATACAAGCCTCATTGGTACTCGATAATGCATTCAACAAAGTGTATTACTCAACGGTAGGTGTGCCTCAAGAAGCTAGAAATATCAAAATGTCTGTCAGTTATCGCTGGTAAACAATAAAAAGAGCAATGATTTTTATCATAACGGGCTGTTGAGTTTAGCA