Homologs in group_44

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05110 FBDBKF_05110 78.4 Morganella morganii S1 cysB HTH-type transcriptional regulator CysB
FBDBKF_10650 FBDBKF_10650 47.2 Morganella morganii S1 cysB DNA-binding transcriptional regulator, LysR family
EHELCC_12480 EHELCC_12480 78.4 Morganella morganii S2 cysB HTH-type transcriptional regulator CysB
EHELCC_14985 EHELCC_14985 47.2 Morganella morganii S2 cysB DNA-binding transcriptional regulator, LysR family
NLDBIP_12820 NLDBIP_12820 78.4 Morganella morganii S4 cysB HTH-type transcriptional regulator CysB
NLDBIP_14815 NLDBIP_14815 47.2 Morganella morganii S4 cysB DNA-binding transcriptional regulator, LysR family
LHKJJB_12680 LHKJJB_12680 78.4 Morganella morganii S3 cysB HTH-type transcriptional regulator CysB
LHKJJB_14530 LHKJJB_14530 47.2 Morganella morganii S3 cysB DNA-binding transcriptional regulator, LysR family
HKOGLL_11295 HKOGLL_11295 78.4 Morganella morganii S5 cysB HTH-type transcriptional regulator CysB
HKOGLL_13150 HKOGLL_13150 47.2 Morganella morganii S5 cysB DNA-binding transcriptional regulator, LysR family
F4V73_RS05565 F4V73_RS05565 78.7 Morganella psychrotolerans cysB HTH-type transcriptional regulator CysB
F4V73_RS14360 F4V73_RS14360 47.2 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
PMI_RS15975 PMI_RS15975 45.3 Proteus mirabilis HI4320 - LysR substrate-binding domain-containing protein

Distribution of the homologs in the orthogroup group_44

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_44

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A9F3 0.0 520 76 0 322 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 0.0 520 76 0 322 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 0.0 520 76 0 322 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P06614 0.0 517 75 0 322 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P45600 0.0 513 74 0 322 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P45105 3.14e-139 399 59 1 321 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B4E8S9 3.84e-102 305 49 1 307 1 ssuR HTH-type transcriptional regulator SsuR Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
B4E8V9 8.54e-93 281 44 0 303 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q47083 2.01e-76 239 42 0 288 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
Q08598 1.7e-68 219 42 0 288 3 cbl HTH-type transcriptional regulator cbl Klebsiella aerogenes
Q8X4M5 1.23e-28 115 31 3 235 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P27111 9.09e-27 110 30 3 235 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P20668 1.34e-26 109 29 2 248 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P39647 4.18e-25 105 28 3 239 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P37499 1.07e-24 104 25 3 246 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P52675 3.13e-24 99 40 0 136 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
A0T0G2 1.82e-22 98 27 5 262 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
P49518 7.23e-22 97 27 5 254 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P39592 1.36e-20 93 26 4 251 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P96725 2.6e-20 92 26 8 294 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
A0T0V5 6.06e-20 91 25 6 297 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P44876 3.83e-19 89 23 1 236 3 HI_0775 Uncharacterized HTH-type transcriptional regulator HI_0775 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q47141 3.9e-19 89 29 5 245 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
P48271 4.74e-19 89 26 5 256 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P25544 5.6e-19 89 28 6 263 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
O34827 1.28e-18 87 35 2 134 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P0ACQ4 1.44e-18 87 25 6 256 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 1.44e-18 87 25 6 256 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 1.44e-18 87 25 6 256 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
Q04778 4.78e-18 86 26 8 259 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P73123 5.02e-18 86 26 7 269 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9X725 6.18e-18 85 24 5 250 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
Q1XDT2 7.91e-18 85 26 5 260 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
Q4G384 9.28e-18 85 25 4 256 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P51205 9.43e-18 85 26 5 260 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
P71318 1.64e-17 84 23 6 286 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q85G62 1.81e-17 84 26 4 260 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
O32255 4.54e-17 83 23 4 257 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P52696 9.63e-17 82 24 5 273 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
Q55459 1.71e-16 82 22 6 245 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q06610 3.3e-16 81 27 8 264 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
Q3MCB5 5.22e-16 80 24 4 251 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
P94387 6.04e-16 80 22 6 263 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
O78432 6.53e-16 80 25 4 260 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P44418 7.03e-16 80 24 5 248 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q5N5I5 8.23e-16 80 23 4 244 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 8.23e-16 80 23 4 244 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q8YQ82 3.29e-15 78 24 4 251 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
A2CI69 3.73e-15 78 24 3 232 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
P45349 5.47e-15 77 26 8 276 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O34701 5.82e-15 77 24 5 249 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
Q6B936 1.07e-14 76 34 2 145 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
O35038 1.14e-14 76 26 5 226 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
O19892 1.11e-13 73 24 5 249 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P52693 1.21e-13 73 24 3 237 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P94403 2.06e-13 72 22 5 249 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P52691 2.17e-13 72 25 8 270 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P70785 7.33e-13 71 22 4 250 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P03030 8.72e-13 71 26 6 243 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P74422 1.74e-12 70 24 3 215 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
A7Z5E4 3.24e-12 69 23 4 239 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
O07906 5.9e-12 68 27 1 126 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
Q8KA72 1.16e-11 68 27 5 180 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P77559 1.26e-11 67 26 10 276 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
P0A2Q4 1.64e-11 67 25 4 199 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 1.64e-11 67 25 4 199 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P0A9G1 2.35e-11 67 25 4 199 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 2.35e-11 67 25 4 199 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 2.35e-11 67 25 4 199 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P77309 3.89e-11 66 21 8 284 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P07774 6.06e-11 65 25 11 310 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
O32186 6.09e-11 65 21 5 286 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
O87883 7.39e-11 63 27 3 182 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
P23841 1.07e-10 65 23 2 242 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
Q63H01 1.3e-10 64 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 1.3e-10 64 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
Q6HPH4 1.47e-10 64 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
A0R8S0 1.5e-10 64 22 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
P42722 1.83e-10 64 26 6 250 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P77744 2.17e-10 64 28 2 149 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P0ACR4 2.21e-10 63 24 5 254 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 2.21e-10 63 24 5 254 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 2.21e-10 63 24 5 254 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
Q81VJ1 3.17e-10 63 21 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
Q81IX0 4.4e-10 63 21 7 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P71025 4.44e-10 63 23 8 285 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
Q9X5P2 6.55e-10 62 25 3 180 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
Q46M57 1.38e-09 61 32 4 128 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P25545 1.48e-09 62 26 9 252 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
Q46M54 1.49e-09 61 32 4 128 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P52669 1.95e-09 61 20 4 245 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P55181 2.1e-09 61 25 2 148 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
Q9HWH8 2.31e-09 60 23 5 210 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52661 2.42e-09 61 27 8 236 1 gbpR HTH-type transcriptional regulator GbpR Azospirillum brasilense
P42427 2.84e-09 60 23 3 169 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
O06703 4.54e-09 60 24 6 274 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q00678 4.76e-09 60 24 2 232 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
P35112 4.98e-09 60 24 2 232 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
Q44311 6.78e-09 59 22 10 303 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
O33945 7.9e-09 59 26 2 146 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
O68014 8.25e-09 59 23 8 271 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P0ACR8 1.43e-08 58 21 3 246 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 1.43e-08 58 21 3 246 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P30864 1.76e-08 58 28 5 196 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
Q88JX7 1.86e-08 58 25 4 216 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P44821 1.99e-08 58 25 1 143 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52684 2.36e-08 58 24 6 233 3 mauR Malonate utilization transcriptional regulator Klebsiella pneumoniae
P52677 4.82e-08 57 27 3 179 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
P52666 4.93e-08 57 28 7 200 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
O33812 5.59e-08 56 22 6 227 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P94678 5.99e-08 57 25 4 190 1 tsaR HTH-type transcriptional regulator TsaR Comamonas testosteroni
P0A2Q2 9.94e-08 56 25 4 189 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 9.94e-08 56 25 4 189 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
Q9EXL7 9.99e-08 56 21 5 206 3 nagR HTH-type transcriptional activator NagR Ralstonia sp.
P05827 1.02e-07 56 25 4 189 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
Q05840 1.43e-07 55 33 2 98 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P52667 1.47e-07 55 25 2 145 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P52670 3.88e-07 54 27 2 130 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P0A4T3 5.21e-07 53 24 3 206 1 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium radiobacter
P0A4T4 5.21e-07 53 24 3 206 1 occR Octopine catabolism/uptake operon regulatory protein OccR Agrobacterium tumefaciens (strain Ach5)
P16400 5.31e-07 53 21 7 238 3 mleR Malolactic fermentation system transcriptional activator Lactococcus lactis subsp. lactis (strain IL1403)
P52678 9.99e-07 53 26 3 179 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P10183 2.5e-06 52 23 6 228 3 nahR HTH-type transcriptional activator NahR Pseudomonas putida
Q9JXW7 2.83e-06 51 27 4 124 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P52689 2.9e-06 51 24 2 122 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
P96194 3.54e-06 49 32 2 101 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P20667 3.89e-06 51 28 8 205 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
A4QH19 4.03e-06 51 27 8 241 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
Q9JPU9 7.02e-06 50 22 12 268 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P27102 8.39e-06 50 28 4 143 3 tcbR HTH-type transcriptional regulator TcbR Pseudomonas sp. (strain P51)
P52690 9.71e-06 50 23 8 250 3 cbbR HTH-type transcriptional regulator CbbR Cereibacter sphaeroides
P0A9F6 1.01e-05 50 28 5 139 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 1.01e-05 50 28 5 139 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 1.01e-05 50 28 5 139 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P9WMF7 1.11e-05 50 28 6 184 1 Rv0377 Uncharacterized HTH-type transcriptional regulator Rv0377 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF6 1.11e-05 50 28 6 184 3 MT0391 Uncharacterized HTH-type transcriptional regulator MT0391 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P77171 1.28e-05 49 26 8 226 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P52595 1.33e-05 49 24 6 250 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
B1JQ39 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 1.41e-05 49 29 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q57748 1.53e-05 49 22 6 253 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P39127 2.13e-05 48 22 6 230 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
Q765S2 2.31e-05 48 25 6 183 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P52665 2.81e-05 47 28 3 145 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
O87324 3.46e-05 48 24 3 182 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
P52662 4.29e-05 48 25 5 153 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
P0ACQ9 6.07e-05 47 23 5 180 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 6.07e-05 47 23 5 180 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 6.07e-05 47 23 5 180 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P72294 8.57e-05 47 23 9 283 3 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium meliloti
P25547 0.000103 47 22 4 212 3 gbpR HTH-type transcriptional regulator GbpR Rhizobium radiobacter
P0DUU5 0.000167 46 22 9 284 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P42507 0.000183 46 28 3 108 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P0ACR0 0.000199 46 25 5 184 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 0.000199 46 25 5 184 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P0ACR2 0.000237 45 24 5 177 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 0.000237 45 24 5 177 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
Q8FK66 0.00036 45 24 10 287 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 0.00036 45 24 10 287 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P52660 0.000464 45 30 2 110 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P0A4T7 0.000623 44 22 5 208 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 0.000623 44 22 5 208 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
Q1R4H3 0.000774 44 33 2 77 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 0.000774 44 33 2 77 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 0.000774 44 33 2 77 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 0.000774 44 33 2 77 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 0.000774 44 33 2 77 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B7LUJ5 0.000781 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B7NF72 0.000781 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7NU32 0.000781 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q3YVK2 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 0.000796 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q329U3 0.000825 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 0.000825 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 0.000825 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 0.000825 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 0.000825 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 0.000825 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 0.000825 44 33 2 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
P16931 0.001 43 22 2 147 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06380
Feature type CDS
Gene cysB
Product HTH-type transcriptional regulator CysB
Location 1398986 - 1399960 (strand: -1)
Length 975 (nucleotides) / 324 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_44
Orthogroup size 14
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13634 LysR family transcriptional regulator, cys regulon transcriptional activator - -

Protein Sequence

MKLQQLRYIVEVVNNDLNVSTTAERLYTSQPGISKQIRMLEDELGIQIFSRSGKHLTHVTPAGEEIVRLSREILSKTEAIRSAAGEHTYPDRGSLSIATTHTQARYVLPPVIKGFIERYPEVSLHMNQGSPTQIAEDVCRGKSDFAIATESLHLYNDLVMLPCYRWNRIVVVTKDHPLAQKREVTLQELATYDIVTYTHGFTGRSDLDEAFGKVGLKPKIVFTATDADVIKTYVRLHLGIGVIASMAFDPMLDSDLVAIDMRDKFSYSTTKIAFRRSGFLRGYMYDFMWRFAPHLTRNLVEQATALRTNEEIEELFKDIELPLV

Flanking regions ( +/- flanking 50bp)

ATGAGCGGAATAACAGAATAATAAGTCTTTTGTAAAGGGATCGTGCTTCTATGAAATTACAACAGTTGCGTTATATCGTTGAAGTGGTGAATAACGATTTAAACGTCTCAACGACAGCAGAGCGTTTATATACCTCTCAGCCGGGGATCAGTAAACAAATTCGTATGCTAGAAGATGAGTTGGGTATACAAATATTCTCTCGCAGTGGTAAGCACTTAACACATGTGACGCCAGCGGGGGAAGAAATTGTCAGATTATCTCGTGAGATATTATCCAAAACAGAAGCTATCCGCTCGGCTGCAGGGGAACACACTTATCCTGATCGCGGTTCGCTTTCTATTGCCACCACTCATACACAAGCGCGTTATGTTTTACCCCCTGTGATTAAAGGTTTTATAGAACGTTATCCCGAAGTGTCATTACATATGAATCAGGGTTCACCGACACAAATTGCAGAAGATGTTTGCCGTGGTAAAAGTGATTTTGCTATAGCGACAGAATCACTACATCTGTATAACGATTTAGTGATGTTACCTTGTTATCGTTGGAATCGTATTGTGGTGGTAACTAAAGATCACCCATTGGCGCAAAAGCGTGAAGTTACCTTACAAGAGCTTGCAACTTACGATATCGTTACTTATACCCATGGTTTTACTGGGCGTTCTGATCTTGACGAAGCCTTTGGTAAAGTGGGTTTAAAGCCTAAAATTGTTTTTACTGCAACGGATGCGGATGTAATAAAAACTTATGTCAGGCTACACTTAGGTATTGGTGTGATTGCGAGTATGGCATTTGATCCGATGCTTGATAGCGATTTAGTCGCTATTGATATGCGTGATAAATTTAGTTATAGCACCACAAAAATTGCATTTCGACGTAGTGGTTTTTTACGCGGTTATATGTATGACTTTATGTGGCGTTTTGCCCCACATCTAACACGTAATTTGGTGGAACAAGCGACAGCTTTACGCACCAATGAAGAAATTGAAGAGTTATTTAAAGATATCGAGTTACCTTTAGTTTAATACGCAAAGGCGGGTATATTATCCCGCCTTTTACCATTATGTAACTTATA