Homologs in group_2248

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17210 FBDBKF_17210 63.9 Morganella morganii S1 osmB osmotically-inducible lipoprotein OsmB
EHELCC_01680 EHELCC_01680 63.9 Morganella morganii S2 osmB osmotically-inducible lipoprotein OsmB
NLDBIP_01780 NLDBIP_01780 63.9 Morganella morganii S4 osmB osmotically-inducible lipoprotein OsmB
LHKJJB_00255 LHKJJB_00255 63.9 Morganella morganii S3 osmB osmotically-inducible lipoprotein OsmB
HKOGLL_00295 HKOGLL_00295 63.9 Morganella morganii S5 osmB osmotically-inducible lipoprotein OsmB
F4V73_RS05970 F4V73_RS05970 61.6 Morganella psychrotolerans osmB osmotically-inducible lipoprotein OsmB

Distribution of the homologs in the orthogroup group_2248

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2248

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADB0 1.23e-10 54 65 0 72 3 osmB Osmotically-inducible lipoprotein B Shigella flexneri
P0ADA7 1.23e-10 54 65 0 72 2 osmB Osmotically-inducible lipoprotein B Escherichia coli (strain K12)
P0ADA8 1.23e-10 54 65 0 72 3 osmB Osmotically-inducible lipoprotein B Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADA9 1.23e-10 54 65 0 72 3 osmB Osmotically-inducible lipoprotein B Escherichia coli O157:H7
P37723 3.75e-10 53 63 0 72 2 osmB Osmotically-inducible lipoprotein B Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06210
Feature type CDS
Gene osmB
Product osmotically-inducible lipoprotein OsmB
Location 1361449 - 1361670 (strand: 1)
Length 222 (nucleotides) / 73 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2248
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05433 Glycine zipper 2TM domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04062 osmotically inducible lipoprotein OsmB - -

Protein Sequence

MNITFKKIGTMCVASVLLFSLAGCSSMTKRDRNTAIGAGAGAIGGAILTDGSPLGTIGGGVLGGVIGHQVGKK

Flanking regions ( +/- flanking 50bp)

ATTATGATAGCAGTAACTTTATAATGTTCTTTATACTGGAGCTTATAAAAATGAATATCACGTTTAAGAAAATTGGAACAATGTGTGTCGCTTCTGTTCTGCTTTTTTCACTTGCGGGTTGTTCAAGCATGACAAAACGCGATCGTAATACAGCAATTGGTGCCGGTGCTGGTGCTATAGGTGGTGCAATTTTAACAGATGGTAGTCCATTAGGAACCATTGGCGGCGGTGTATTAGGTGGTGTTATTGGCCATCAAGTTGGCAAAAAATAACTATTACCGTTATTTACTATGCTAAACTGAGCTTATAAATTTTTATAAGC