Homologs in group_246

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02995 FBDBKF_02995 25.8 Morganella morganii S1 gadA Glutamate or tyrosine decarboxylase or a related PLP-dependent protein
EHELCC_07540 EHELCC_07540 25.8 Morganella morganii S2 gadA Glutamate or tyrosine decarboxylase or a related PLP-dependent protein
NLDBIP_07865 NLDBIP_07865 25.8 Morganella morganii S4 gadA Glutamate or tyrosine decarboxylase or a related PLP-dependent protein
LHKJJB_07400 LHKJJB_07400 25.8 Morganella morganii S3 gadA Glutamate or tyrosine decarboxylase or a related PLP-dependent protein
HKOGLL_03530 HKOGLL_03530 25.8 Morganella morganii S5 gadA Glutamate or tyrosine decarboxylase or a related PLP-dependent protein
F4V73_RS11910 F4V73_RS11910 24.7 Morganella psychrotolerans - pyridoxal-dependent decarboxylase
PMI_RS11930 PMI_RS11930 26.2 Proteus mirabilis HI4320 - pyridoxal-dependent decarboxylase

Distribution of the homologs in the orthogroup group_246

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_246

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
J7GQ11 1.02e-67 235 29 12 507 1 tdc L-tyrosine decarboxylase Levilactobacillus brevis
A0A481NV25 4.39e-60 214 26 11 506 1 tdc L-tyrosine decarboxylase Enterococcus faecium
Q838D6 1.86e-59 212 27 12 528 1 tdc L-tyrosine decarboxylase Enterococcus faecalis (strain ATCC 700802 / V583)
P0DTQ4 1.86e-59 212 27 12 528 1 tyrDC L-tyrosine decarboxylase Enterococcus faecalis (strain EnGen0310 / MMH594)
A4G060 1.92e-10 66 24 10 264 3 mfnA Probable L-tyrosine/L-aspartate decarboxylase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Q6M0Y7 5.44e-10 65 23 11 273 3 mfnA Probable L-tyrosine/L-aspartate decarboxylase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
A6VIC0 7.05e-10 65 24 10 255 3 mfnA Probable L-tyrosine/L-aspartate decarboxylase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
A6URB4 6.55e-09 62 23 10 255 3 mfnA Probable L-tyrosine/L-aspartate decarboxylase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
A6UVR4 6.89e-09 62 25 9 223 3 mfnA Probable L-tyrosine/L-aspartate decarboxylase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
O27188 1.72e-08 60 24 10 254 3 mfnA Probable L-tyrosine/L-aspartate decarboxylase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q60358 5.57e-08 58 26 7 191 1 mfnA L-tyrosine/L-aspartate decarboxylase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A5ULW4 0.000197 47 23 10 230 3 mfnA Probable L-tyrosine/L-aspartate decarboxylase Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05835
Feature type CDS
Gene disA
Product swarming inhibition tyrosine decarboxylase DisA
Location 1277101 - 1278933 (strand: 1)
Length 1833 (nucleotides) / 610 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_246
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF21391 Tyrosine decarboxylase, C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0076 Amino acid transport and metabolism (E) E Glutamate or tyrosine decarboxylase or a related PLP-dependent protein

Protein Sequence

MANHKETCLSAAERVFDTRTVDTLTCYHREMVKMLMDSESFYSSPNNSQINTNERLENKIKSNTIENKAVKGSYGDILNNLNQQLMNNKPEIEPYFSHYNSPVMRLAKLGYLSALAYNADNVFNKHSPIQKQQEQKITHDLCKLIGFEPDKAFGHITTSHVFACYEILWALRNLKTLPMAIARHPKSRDLVADKKAFELFNMSITDILSISEQLYERDIFDDVSHLTCRGTGMTRTMHLGKLLVPIYRFEFWKKAMDILGLGYDNLIALPIDEEFKTDIAKTRHIVLRLIEQGEPILGIIGVLGSSTYGSIDKLKPLFELREECEKQHNNSFYIHIDASQLGYMKSLFLDENNSIIPYNILCDKLKQEAPLLELTSDIYDSFTQLSRADSVSFEPFQAGFSPYPTGIVCIKDARLSRFLANPPKLCPEEGNIPDEIDGIQSAPAVASMWGIHQLYAFNHFGYGQCAQNQWEARVKLEQQLKQENEFEKSGISYAIHILPVSDFNKLTFAIALKGNQCLKIQNQLNNAIYKNLEIKSQYKPDLNLLVLCARNSDDIPAQFCQQCHLGKDEWKQVNHLSLLQLTIKNTDKWSEEHIKAGYDYIKKVVLSALK

Flanking regions ( +/- flanking 50bp)

ACTCAATTCTGATTAAAATTGATAACAAAAATTTATATATAGGTGCGATGATGGCAAATCACAAAGAAACCTGTCTGAGTGCTGCAGAGCGTGTGTTTGATACCCGAACCGTGGATACCCTAACATGTTATCATCGAGAGATGGTAAAGATGTTGATGGATAGTGAGTCCTTTTATTCTAGTCCAAATAACTCACAGATAAATACTAATGAGAGATTAGAGAACAAAATAAAAAGCAATACCATTGAAAATAAAGCTGTGAAGGGATCTTATGGTGATATTTTAAATAATTTAAACCAGCAGCTAATGAATAATAAACCTGAGATTGAGCCTTATTTCTCACATTACAACTCTCCCGTCATGCGATTGGCGAAATTAGGCTACCTTTCTGCACTGGCCTATAATGCTGATAATGTTTTTAACAAACATTCACCCATACAAAAACAGCAAGAGCAAAAAATAACTCATGATTTGTGTAAACTAATCGGTTTTGAACCAGATAAAGCATTTGGGCATATTACCACCAGTCATGTTTTTGCTTGTTATGAAATTTTGTGGGCTTTGAGAAATTTAAAAACACTGCCGATGGCGATTGCACGTCATCCAAAATCAAGAGATCTGGTTGCAGATAAAAAAGCATTTGAGTTATTTAATATGTCTATCACTGATATTTTATCCATCAGTGAACAGCTATATGAGCGAGATATTTTTGATGATGTCAGCCATTTAACTTGTCGTGGCACCGGCATGACAAGAACGATGCATTTAGGTAAATTACTAGTACCGATATACCGCTTCGAATTTTGGAAGAAGGCGATGGATATCTTGGGGTTAGGTTATGATAATCTCATTGCCTTACCAATAGATGAAGAGTTTAAAACAGATATAGCTAAAACGCGTCATATTGTGCTTCGCTTAATAGAGCAGGGAGAGCCGATACTCGGTATTATTGGCGTGTTAGGCTCATCGACATACGGTAGCATTGACAAACTTAAGCCTCTTTTCGAATTACGTGAAGAGTGTGAAAAACAACATAACAACTCATTCTATATTCACATTGATGCATCCCAATTAGGCTATATGAAAAGCCTGTTTCTTGACGAAAATAATAGCATCATCCCTTATAACATATTGTGCGATAAACTTAAGCAAGAAGCACCTTTACTTGAGTTAACCTCAGATATTTATGATAGTTTTACTCAGCTATCAAGAGCTGATTCTGTTTCTTTTGAGCCATTTCAAGCGGGATTTTCTCCTTATCCTACGGGGATTGTTTGTATAAAAGATGCTCGATTAAGTCGTTTTCTCGCTAACCCGCCAAAACTGTGCCCAGAAGAGGGGAATATTCCCGATGAAATTGATGGGATCCAATCAGCACCTGCGGTTGCATCAATGTGGGGGATCCATCAGCTATATGCTTTTAATCATTTTGGGTATGGGCAATGCGCTCAAAATCAATGGGAAGCTAGAGTAAAACTGGAACAACAATTAAAACAAGAGAACGAATTTGAAAAATCGGGTATCTCTTATGCTATTCATATTTTGCCAGTTTCAGATTTTAATAAACTCACTTTTGCCATTGCTCTTAAAGGCAACCAATGTTTAAAAATACAAAATCAGCTAAATAATGCTATTTATAAAAATTTAGAAATAAAGAGCCAATATAAGCCAGATCTCAACCTATTAGTGCTGTGTGCTCGTAATAGCGATGATATACCTGCTCAGTTTTGTCAACAATGTCATTTAGGTAAAGATGAATGGAAGCAAGTTAACCACTTAAGTCTTTTACAATTAACGATAAAAAACACTGATAAATGGAGTGAAGAGCATATTAAAGCAGGGTACGACTATATTAAAAAAGTTGTCCTATCTGCATTAAAATAGCTATTTTGTTCTATTTATTATTTAACATAGTAAAAGTTAGCAAGGAAAAG