Homologs in group_4424

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4424

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4424

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q86KR9 3.03e-13 70 26 8 222 1 phyA Prolyl 4-hydroxylase subunit alpha Dictyostelium discoideum
Q9GZT9 2.29e-11 65 31 10 190 1 EGLN1 Egl nine homolog 1 Homo sapiens
P59722 3.97e-10 61 31 9 190 2 Egln1 Egl nine homolog 1 (Fragment) Rattus norvegicus
G5EBV0 6.63e-10 61 27 9 211 1 egl-9 Hypoxia-inducible factor prolyl hydroxylase Caenorhabditis elegans
Q91YE3 1.42e-09 60 30 9 190 1 Egln1 Egl nine homolog 1 Mus musculus
Q6DE73 4.39e-06 50 38 2 76 2 ogfod1 Prolyl 3-hydroxylase OGFOD1 Xenopus laevis
Q62630 5.5e-06 48 27 11 194 1 Egln3 Prolyl hydroxylase EGLN3 Rattus norvegicus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05315
Feature type CDS
Gene -
Product 2OG-Fe(II) oxygenase
Location 1162545 - 1163153 (strand: 1)
Length 609 (nucleotides) / 202 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4424
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF13640 2OG-Fe(II) oxygenase superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3751 Translation, ribosomal structure and biogenesis (J)
Posttranslational modification, protein turnover, chaperones (O)		 JO Proline 4-hydroxylase (includes Rps23 Pro-64 3,4-dihydroxylase Tpa1), contains SM-20 domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07394 SM-20-related protein - -

Protein Sequence

MNIASLLEQIADKGWCVWDDFLTPEAVKQLRACFGNDAQQARIGRHENLLAETTIRSDKIRWLEPQMGEPVQHYLMQMESIQRAVNREFFLGLFEYEAHFACYEKGAFYKKHLDAFKENVTRRLTTVLYLNDEWTPQDGGELVIYDLDDNQLATVAPQGGRLVVFLSEQFPHEVLPTHKERISIAGWFRVNGVRDNFLDIAS

Flanking regions ( +/- flanking 50bp)

TAATATGGTGCTATAAGATAGTTTCCCCTGTTAATCAGACAATATGACTAATGAATATAGCAAGTCTTCTTGAACAAATTGCAGATAAAGGTTGGTGTGTATGGGATGATTTCCTTACACCAGAGGCGGTTAAACAATTGCGTGCTTGTTTTGGTAATGATGCACAACAAGCACGTATAGGACGTCATGAAAACCTATTAGCAGAAACCACGATACGCAGTGATAAAATTCGTTGGCTAGAGCCGCAAATGGGAGAGCCAGTTCAACATTATCTTATGCAGATGGAAAGCATTCAACGAGCAGTTAATCGTGAGTTCTTTTTAGGGCTGTTTGAATATGAAGCTCATTTCGCTTGTTATGAAAAAGGTGCTTTCTATAAAAAACATCTTGATGCATTTAAAGAAAATGTCACAAGACGTTTAACGACAGTGTTATATCTTAATGATGAATGGACACCACAAGACGGTGGAGAGCTAGTTATCTATGATCTGGATGATAATCAATTAGCGACAGTCGCCCCTCAAGGTGGTCGTTTAGTGGTTTTTCTTTCAGAACAATTTCCACATGAAGTATTACCTACTCATAAAGAAAGGATCAGTATTGCAGGGTGGTTTCGAGTTAATGGTGTCAGAGATAATTTTCTCGATATCGCCAGCTAAATGATGCAATAAAGTGTTATTGTCGTAATAGAAATAGCATGGGATTAGGC