Homologs in group_4415

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4415

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4415

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A3T2 1.05e-28 116 29 7 299 4 bcsP31 31 kDa immunogenic protein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P0A3T3 1.05e-28 116 29 7 299 4 bcsP31 31 kDa immunogenic protein Brucella abortus biovar 1 (strain 9-941)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05135
Feature type CDS
Gene -
Product TAXI family TRAP transporter solute-binding subunit
Location 1121778 - 1122812 (strand: -1)
Length 1035 (nucleotides) / 344 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4415
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF16868 NMT1-like family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2358 General function prediction only (R) R TRAP-type uncharacterized transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07080 uncharacterized protein - -

Protein Sequence

MRIRKTKLAIGIVAVIAVVSLAMIGKKENANKQFLSVATASTGGTYYPMGVGLANVWSTHLKDRGIQVTGQSSAGSIENIYLMQQNEAQLSILQSLLAVEAYEGVRNFEGKPEKNLRSISMLWPNVEHFVLMNDKVKTGTLDDIRATSFSVGPQASGTEQSTIIILKGVNLTKKEITPEYLGYGDTVSAMRDGRLDGGALPAGVPASAVTDMYASGVNAKLLEVTDKQLDDINHIANSWFRFEIPANTYPRQAEKVNTIAQPNILMTTTSIDDQLVYELTKTMFENLPEVHQVHSAAKYITTENALKGVSVPLHLGAYRYYKEIGLDIPDYLIPPEAQTQTNNK

Flanking regions ( +/- flanking 50bp)

CAAGTTGATGTGAAATATTCACCTGCGTTTTTATGTACAGGAACAACATCATGAGAATAAGAAAAACAAAGCTTGCCATCGGTATTGTTGCTGTTATTGCTGTTGTATCACTAGCAATGATCGGCAAAAAAGAGAATGCCAATAAGCAATTTCTCTCTGTAGCAACGGCCTCAACAGGAGGAACTTATTACCCGATGGGAGTCGGTTTAGCCAATGTTTGGAGCACCCACCTCAAGGATAGAGGAATACAAGTCACAGGGCAGTCCTCTGCTGGCTCAATTGAAAATATCTATTTAATGCAACAAAACGAAGCTCAGCTTTCTATTCTACAAAGTCTATTAGCTGTGGAAGCTTACGAAGGTGTACGTAATTTTGAAGGCAAACCAGAAAAAAATCTACGTTCTATATCAATGCTTTGGCCAAATGTAGAGCACTTTGTCTTAATGAATGACAAAGTAAAAACAGGAACATTGGATGATATTCGTGCCACCAGCTTCTCTGTCGGGCCACAAGCCAGTGGCACTGAACAATCGACCATTATCATTCTTAAAGGTGTGAATTTAACTAAAAAAGAGATCACTCCTGAATATCTTGGTTATGGAGATACCGTTTCAGCAATGCGTGATGGACGCCTTGATGGGGGAGCATTACCTGCTGGTGTTCCCGCCTCTGCGGTTACCGATATGTATGCCAGTGGTGTTAATGCCAAATTACTTGAAGTGACTGATAAGCAACTTGATGATATTAATCATATTGCTAACTCTTGGTTTCGCTTTGAAATACCAGCAAATACCTACCCTCGCCAAGCAGAAAAAGTAAACACCATTGCACAACCTAATATCTTAATGACAACCACAAGTATTGATGACCAGTTAGTTTATGAATTGACTAAAACCATGTTTGAAAACTTACCAGAAGTTCATCAAGTACATAGTGCTGCAAAATACATCACCACCGAAAATGCGTTAAAAGGTGTTTCTGTGCCATTACACCTTGGAGCTTATCGTTATTACAAAGAAATTGGATTAGATATCCCTGACTATTTAATTCCACCTGAAGCTCAAACGCAAACTAATAATAAATAACAGGAGTGAGTTATGACTAATAATGACCACCTAACTCCGGTAGAGCCACC