Homologs in group_4412

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4412

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4412

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64505 4.22e-18 73 43 1 78 4 yebV Uncharacterized protein YebV Shigella flexneri
P64503 4.22e-18 73 43 1 78 1 yebV Uncharacterized protein YebV Escherichia coli (strain K12)
P64504 4.22e-18 73 43 1 78 4 yebV Uncharacterized protein YebV Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04910
Feature type CDS
Gene -
Product DUF1480 family protein
Location 1072981 - 1073223 (strand: -1)
Length 243 (nucleotides) / 80 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4412
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF07351 Protein of unknown function (DUF1480)

Protein Sequence

MNKTTLKIACYEIEDVTLKHSSDNQLTYVHIPCDYDKEFCMQLDGWDENTSIPAQLKDKNILLYRHAYDKENHHWILKVA

Flanking regions ( +/- flanking 50bp)

CTTAAACTATGAAAGCACAACACAACATCGCATAACCTTGGAGCTATAACATGAATAAAACAACCTTAAAAATTGCTTGTTATGAAATTGAAGATGTTACTTTGAAACACTCTTCCGATAACCAACTCACTTATGTTCATATTCCATGTGATTATGATAAAGAGTTTTGTATGCAATTAGATGGATGGGATGAAAACACCAGCATTCCTGCGCAACTGAAAGATAAAAATATTCTGCTTTACCGTCATGCCTATGACAAAGAAAACCACCATTGGATTTTAAAAGTAGCCTAATCGCATGTTAAAGCATCATAAAAAAAGCCAGGTAAATCATTTACCTGGCT