Homologs in group_4411

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4411

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4411

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27842 2.48e-16 72 35 3 134 4 yigF Uncharacterized protein YigF Escherichia coli (strain K12)
P0A1T8 2.07e-15 70 33 3 134 4 yigF Uncharacterized protein YigF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1T9 2.07e-15 70 33 3 134 4 yigF Uncharacterized protein YigF Salmonella typhi

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04880
Feature type CDS
Gene -
Product DUF2628 domain-containing protein
Location 1068184 - 1068576 (strand: -1)
Length 393 (nucleotides) / 130 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4411
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF10947 Protein of unknown function (DUF2628)

Protein Sequence

MNKEYSAKWEERFDFFEKYGSPKSPEYKAAYKALTFGKRILIGMNIWAFFFGFIYFLILGLWRKALTLFGINVAIIIVVSFIVEGLSLSPSILNVVSIVLNFLWAATANYAYYLKEKKNDQGWNPFTGVF

Flanking regions ( +/- flanking 50bp)

AATGCGTTTTTTTATGACTACAATTAAATGACCCTCTAACAGGAATTATGATGAATAAAGAATATTCTGCCAAATGGGAAGAGCGTTTTGATTTCTTCGAAAAATATGGTTCTCCTAAATCTCCAGAATACAAGGCTGCATATAAAGCACTGACTTTCGGTAAGCGTATTCTAATTGGGATGAATATCTGGGCTTTCTTCTTTGGCTTTATTTATTTTCTTATCCTTGGTTTATGGCGTAAAGCATTAACTTTATTCGGGATTAATGTTGCTATTATCATTGTGGTAAGTTTTATCGTGGAAGGACTTTCCCTAAGCCCTTCAATTCTCAATGTAGTCAGTATTGTGCTCAACTTCTTATGGGCGGCGACAGCTAATTATGCTTACTACTTAAAAGAAAAGAAAAATGATCAAGGTTGGAACCCGTTCACCGGTGTATTCTGAAAATAGATCAATAAGTTAAGTTAAATTAACATTAATCAAATTAGCAGAAA