Homologs in group_4409

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4409

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4409

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q3KJK7 5.21e-15 70 30 2 140 3 hicB Antitoxin HicB Pseudomonas fluorescens (strain Pf0-1)
Q7MZD8 4.72e-11 60 26 2 134 3 hicB2 Antitoxin HicB 2 Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
P67697 7.34e-06 46 27 0 97 1 hicB Antitoxin HicB Escherichia coli (strain K12)
P67698 7.34e-06 46 27 0 97 3 hicB Antitoxin HicB Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04855
Feature type CDS
Gene -
Product hypothetical protein
Location 1064059 - 1064490 (strand: -1)
Length 432 (nucleotides) / 143 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4409
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18843 antitoxin HicB - -

Protein Sequence

MFNYPATSHFDEESETYEITYRDFDNIHAVAYTEDDIELEASDILHVGLEEFISSKMPIPMPSEPQSGDFIVYLPPISCLKIALHNAMLTTKTKKADLARKMNLNSAQIERLLDINQTSKIDSLEQALYLLGYHIAISVHKQR

Flanking regions ( +/- flanking 50bp)

TAAATATGCTTTAATCATGAGCATAAATCTTAAAATTAATTAGGCAATTTATGTTCAATTATCCAGCAACATCCCATTTTGACGAAGAAAGTGAAACTTACGAGATTACTTATCGTGATTTTGACAATATACATGCAGTGGCATATACAGAAGATGATATTGAACTAGAAGCCTCAGATATTTTACATGTAGGACTTGAAGAGTTTATTTCGAGTAAAATGCCGATCCCTATGCCTTCTGAGCCTCAATCAGGGGATTTTATTGTTTATCTTCCCCCTATTAGTTGCTTAAAAATCGCATTACATAATGCCATGTTAACAACAAAAACTAAAAAGGCAGATCTGGCAAGAAAAATGAATCTAAATAGCGCCCAAATTGAGCGTTTACTCGATATCAATCAAACTTCAAAAATCGATAGCCTAGAGCAAGCGCTTTACCTATTGGGTTACCACATTGCTATATCTGTGCATAAACAGCGCTAGTTCGATATTTTCATCTAATAAAAAAGGTGGCCATAATAATTTACGCCACC