Homologs in group_542

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01265 FBDBKF_01265 75.4 Morganella morganii S1 - ParD-like family protein
EHELCC_00280 EHELCC_00280 75.4 Morganella morganii S2 - ParD-like family protein
NLDBIP_03180 NLDBIP_03180 75.4 Morganella morganii S4 - ParD-like family protein
LHKJJB_04695 LHKJJB_04695 75.4 Morganella morganii S3 - ParD-like family protein
HKOGLL_02350 HKOGLL_02350 75.4 Morganella morganii S5 - ParD-like family protein
F4V73_RS07305 F4V73_RS07305 76.9 Morganella psychrotolerans - ParD-like family protein

Distribution of the homologs in the orthogroup group_542

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_542

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04835
Feature type CDS
Gene -
Product ParD-like family protein
Location 1061329 - 1061526 (strand: 1)
Length 198 (nucleotides) / 65 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_542
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system

Protein Sequence

MGIVKISDELHEYLRKASNVMSRSVNAQAEFWIKIGIQAELNPEKTFPMIINEMLEKEAIKQEHK

Flanking regions ( +/- flanking 50bp)

TTATTATATAATATATATGTTTTATTATAATTCGTATATAAGGGTTAAGTGTGGGTATTGTAAAAATTTCTGATGAGCTACATGAGTATCTTCGTAAAGCAAGTAATGTGATGTCTCGATCAGTTAATGCACAAGCAGAGTTTTGGATAAAAATTGGTATTCAAGCAGAATTAAATCCAGAAAAAACGTTTCCAATGATTATTAATGAAATGTTAGAAAAAGAAGCAATAAAACAAGAGCATAAGTAAATATAAAGGAGATTAATATGGATAAAATTACGATTAAAACCCCTGAGGAA