Homologs in group_1750

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12200 FBDBKF_12200 36.0 Morganella morganii S1 - Carboxymuconolactone decarboxylase family protein
EHELCC_14105 EHELCC_14105 36.0 Morganella morganii S2 - Carboxymuconolactone decarboxylase family protein
NLDBIP_15200 NLDBIP_15200 36.0 Morganella morganii S4 - Carboxymuconolactone decarboxylase family protein
LHKJJB_15410 LHKJJB_15410 36.0 Morganella morganii S3 - Carboxymuconolactone decarboxylase family protein
HKOGLL_14530 HKOGLL_14530 36.0 Morganella morganii S5 - Carboxymuconolactone decarboxylase family protein
PMI_RS01330 PMI_RS01330 37.8 Proteus mirabilis HI4320 - carboxymuconolactone decarboxylase family protein

Distribution of the homologs in the orthogroup group_1750

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1750

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q57498 9.02e-19 78 53 0 109 4 HI_1053 Uncharacterized protein HI_1053 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P27749 7.3e-13 62 31 0 91 4 H16_B0147 Uncharacterized protein H16_B0147 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P08304 2.91e-09 53 35 0 90 4 None Uncharacterized protein 4 in cox locus Paracoccus denitrificans

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04490
Feature type CDS
Gene -
Product carboxymuconolactone decarboxylase family protein
Location 1000049 - 1000384 (strand: -1)
Length 336 (nucleotides) / 111 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1750
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF02627 Carboxymuconolactone decarboxylase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0599 General function prediction only (R) R Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] Benzoate degradation
Metabolic pathways
Microbial metabolism in diverse environments
Degradation of aromatic compounds		 -

Protein Sequence

MLNWNEYRKQLMGRIGELGKLTPDTVTGYQALSNAGKKTNHLDAKTRELIALAVAVTTRCDGCIAVHADTALKLGASHEEIAEALGVAVALNTGAAMVYSARVLDAIAPEN

Flanking regions ( +/- flanking 50bp)

CATCCCATAATGTCAACCAATAATTCAGTTAACTCAATAAGGTTAATATCATGCTTAATTGGAATGAATATCGAAAACAATTAATGGGACGTATTGGTGAGTTAGGAAAATTAACACCTGATACGGTTACTGGCTACCAAGCACTTTCCAATGCAGGTAAAAAAACTAATCATTTAGATGCAAAAACAAGAGAATTAATCGCATTAGCAGTTGCAGTCACAACACGCTGTGATGGTTGTATCGCCGTACATGCTGACACCGCTTTAAAGTTGGGTGCTAGTCATGAAGAAATTGCAGAAGCACTCGGTGTTGCTGTTGCATTAAATACTGGTGCTGCGATGGTTTATTCTGCTCGAGTATTGGATGCTATTGCACCTGAAAATTAATTCGTAATAAATCAATATCAGGGATATTAATTCAATAATCTCAATATATG