Homologs in group_220

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00235 FBDBKF_00235 30.1 Morganella morganii S1 - DNA replication protein
EHELCC_01310 EHELCC_01310 30.1 Morganella morganii S2 - DNA replication protein
NLDBIP_02150 NLDBIP_02150 30.1 Morganella morganii S4 - DNA replication protein
LHKJJB_03665 LHKJJB_03665 30.1 Morganella morganii S3 - DNA replication protein
HKOGLL_03380 HKOGLL_03380 30.1 Morganella morganii S5 - DNA replication protein
F4V73_RS06230 F4V73_RS06230 33.9 Morganella psychrotolerans - replication protein
PMI_RS04670 PMI_RS04670 39.1 Proteus mirabilis HI4320 - conserved phage C-terminal domain-containing protein

Distribution of the homologs in the orthogroup group_220

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_220

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P03688 2.85e-33 129 45 3 154 3 O Replication protein O Escherichia phage lambda
P14815 9.11e-31 122 47 0 113 3 15 Replication protein 15 Enterobacteria phage phi80
P0AD35 1.57e-15 75 41 1 87 3 yfdO Protein YfdO Escherichia coli (strain K12)
P0AD36 1.57e-15 75 41 1 87 3 yfdO Uncharacterized protein YfdO Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04460
Feature type CDS
Gene -
Product hypothetical protein
Location 992419 - 993510 (strand: 1)
Length 1092 (nucleotides) / 363 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_220
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Protein Sequence

MSLLLLKSRPLVVIPELAVRLGLNEAMLLQQIQYWLTETTSGVEYDGSRWIYNTVEEWKNQFPFFSESTIKRAFTNLKKQGVLRIEQINKSNHDRTNYYAINYDHHLLTDGVNMTQSNSDNTSNRAVQNDLIDKRKLKPSNSSKCTVLNGSKWPDLTENTTEITSESTTETDHSSQNSDESSDQPKNDFLTRYPEAVIYSANFQKWGDEGDLKTAKWMFGRVKKLNPSALEPTWYDWANDIRLMRQIDGRTHEQICALFDWANKDSFWYQNILSPRKLRKHFDELFVRSQKPKDELKVQVDTVERDSAFSRLIGSRSKPKNRIEEIALELAGKTGIRRMSEFSGRQAWSSIWKQAIEMLQETQ

Flanking regions ( +/- flanking 50bp)

TACAGCGTTTTAAAGAGAAGTACACACGTATTAAGTAATGAGGTGGCAAGATGAGTTTATTATTACTAAAAAGTCGCCCTTTAGTCGTTATTCCTGAATTAGCGGTACGTCTTGGTTTAAATGAGGCGATGCTGTTACAGCAAATTCAATATTGGCTAACTGAAACTACTTCAGGTGTTGAATATGACGGCTCACGCTGGATTTATAACACAGTTGAAGAGTGGAAGAATCAATTTCCTTTTTTCTCTGAATCAACGATTAAACGTGCTTTTACTAATTTGAAAAAGCAGGGTGTTTTACGCATTGAGCAAATCAATAAATCGAACCATGACCGTACTAATTATTATGCGATTAACTACGATCACCATCTGCTAACTGATGGGGTCAATATGACCCAATCGAACAGTGATAATACATCTAATCGAGCAGTTCAAAATGACCTTATCGATAAGCGCAAATTGAAACCGTCAAACAGTTCAAAATGCACTGTTCTGAACGGGTCAAAATGGCCTGATCTTACAGAGAATACAACAGAGATTACTTCAGAGAGTACAACAGAAACAGATCATTCGTCGCAGAATTCTGACGAATCCAGCGACCAGCCGAAAAATGATTTTTTAACTCGTTATCCTGAAGCAGTGATTTACAGCGCTAACTTCCAAAAATGGGGCGATGAAGGTGATTTAAAAACGGCGAAATGGATGTTTGGTCGTGTTAAAAAACTAAATCCATCTGCGCTAGAGCCTACTTGGTATGACTGGGCGAACGATATTCGTTTGATGCGTCAAATCGATGGGCGTACCCATGAGCAAATTTGTGCCTTGTTCGATTGGGCCAACAAAGACTCATTCTGGTACCAAAACATTTTAAGTCCTCGTAAGTTACGTAAACACTTTGATGAACTATTCGTTCGTAGTCAAAAGCCAAAGGATGAGCTAAAGGTTCAAGTTGACACCGTTGAACGTGATAGTGCCTTTTCCCGCTTGATTGGCTCTCGGTCTAAACCTAAAAACCGCATTGAAGAAATTGCACTTGAGCTAGCAGGTAAAACAGGCATTCGTCGTATGAGTGAGTTTTCAGGTCGCCAAGCATGGAGCAGCATTTGGAAGCAAGCGATAGAAATGTTACAGGAGACTCAGTAATGCTAACTAAATACATTTTGTTCGTTGGTTTTTGGTTTGTAGTGACATTA