Homologs in group_1969

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14765 FBDBKF_14765 86.1 Morganella morganii S1 tmaR PTS system regulator TmaR
EHELCC_15570 EHELCC_15570 86.1 Morganella morganii S2 tmaR PTS system regulator TmaR
NLDBIP_16100 NLDBIP_16100 86.1 Morganella morganii S4 tmaR PTS system regulator TmaR
LHKJJB_15740 LHKJJB_15740 86.1 Morganella morganii S3 tmaR PTS system regulator TmaR
HKOGLL_14860 HKOGLL_14860 86.1 Morganella morganii S5 tmaR PTS system regulator TmaR
F4V73_RS07560 F4V73_RS07560 84.3 Morganella psychrotolerans tmaR PTS system regulator TmaR

Distribution of the homologs in the orthogroup group_1969

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1969

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4ETB9 3.22e-75 220 100 0 112 3 PMI0851 UPF0265 protein PMI0851 Proteus mirabilis (strain HI4320)
A8GGR6 1.92e-63 191 89 0 105 3 Spro_3208 UPF0265 protein Spro_3208 Serratia proteamaculans (strain 568)
Q1C9P9 6.73e-63 189 88 0 105 3 YPA_0855 UPF0265 protein YPA_0855 Yersinia pestis bv. Antiqua (strain Antiqua)
B1JPU8 6.73e-63 189 88 0 105 3 YPK_2514 UPF0265 protein YPK_2514 Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q1CGY2 6.73e-63 189 88 0 105 3 YPN_2420 UPF0265 protein YPN_2420 Yersinia pestis bv. Antiqua (strain Nepal516)
A7FJF8 6.73e-63 189 88 0 105 3 YpsIP31758_2417 UPF0265 protein YpsIP31758_2417 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B2JZP2 6.73e-63 189 88 0 105 3 YPTS_1683 UPF0265 protein YPTS_1683 Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q66C39 6.73e-63 189 88 0 105 3 YPTB1571 UPF0265 protein YPTB1571 Yersinia pseudotuberculosis serotype I (strain IP32953)
Q8ZFW5 6.73e-63 189 88 0 105 3 YPO1560 UPF0265 protein YPO1560/y2607/YP_1448 Yersinia pestis
A4TKJ3 6.73e-63 189 88 0 105 3 YPDSF_1416 UPF0265 protein YPDSF_1416 Yersinia pestis (strain Pestoides F)
A1JTU7 4.96e-62 187 87 0 105 3 YE2755 UPF0265 protein YE2755 Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q6D434 1.75e-60 183 86 0 105 3 ECA2560 UPF0265 protein ECA2560 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q7N376 3.17e-60 182 84 0 105 3 plu2843 UPF0265 protein plu2843 Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
C6DF99 4.36e-60 182 85 0 105 3 PC1_1767 UPF0265 protein PC1_1767 Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q8KR41 2.23e-55 170 79 0 103 3 yeeX UPF0265 protein YeeX Escherichia fergusonii
A7MJN1 2.99e-55 170 80 1 105 3 ESA_01212 UPF0265 protein ESA_01212 Cronobacter sakazakii (strain ATCC BAA-894)
P0A8M9 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Shigella flexneri
B2TYH5 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B1LP36 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli (strain SMS-3-5 / SECEC)
B6I833 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli (strain SE11)
P0A8M6 4.36e-55 169 78 0 103 1 yeeX UPF0265 protein YeeX Escherichia coli (strain K12)
B1IZQ6 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A8M7 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TG79 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A8A1N0 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli O9:H4 (strain HS)
C4ZQR6 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli (strain K12 / MC4100 / BW2952)
B5YTE1 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A8M8 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli O157:H7
B7UT45 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZNH9 4.36e-55 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia coli O139:H28 (strain E24377A / ETEC)
Q2NTW6 9.44e-55 169 77 0 105 3 SG1134 UPF0265 protein SG1134 Sodalis glossinidius (strain morsitans)
P67605 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67606 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella typhi
B4TMJ8 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella schwarzengrund (strain CVM19633)
B5BFD0 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella paratyphi A (strain AKU_12601)
C0Q1L6 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella paratyphi C (strain RKS4594)
A9MSK6 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PDQ9 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4SX27 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella newport (strain SL254)
B4T911 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella heidelberg (strain SL476)
B5RBP9 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QZJ9 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella enteritidis PT4 (strain P125109)
B5FM27 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella dublin (strain CT_02021853)
Q57MT7 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella choleraesuis (strain SC-B67)
A9MLN4 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5EX25 1.01e-54 169 77 0 103 3 yeeX UPF0265 protein YeeX Salmonella agona (strain SL483)
B7LTX6 1.13e-54 169 78 0 103 3 yeeX UPF0265 protein YeeX Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A6TBB2 2.76e-54 167 79 0 102 3 KPN78578_24220 UPF0265 protein KPN78578_24220 Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XPI0 2.76e-54 167 79 0 102 3 KPK_1722 UPF0265 protein KPK_1722 Klebsiella pneumoniae (strain 342)
C5BD23 3.17e-54 167 78 0 103 3 NT01EI_1321 UPF0265 protein NT01EI_1321 Edwardsiella ictaluri (strain 93-146)
A4WC14 6.68e-54 167 76 0 103 3 Ent638_2575 UPF0265 protein Ent638_2575 Enterobacter sp. (strain 638)
B2VFM6 1.09e-52 163 78 1 106 3 ETA_13650 UPF0265 protein ETA_13650 Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A4SHW1 3.1e-49 154 71 0 105 3 ASA_0299 UPF0265 protein ASA_0299 Aeromonas salmonicida (strain A449)
Q492K6 8.25e-43 138 74 0 97 3 BPEN_475 UPF0265 protein BPEN_475 Blochmanniella pennsylvanica (strain BPEN)
Q65S81 2.01e-42 138 67 0 100 3 MS1572 UPF0265 protein MS1572 Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q7VLP5 1.18e-40 133 57 1 112 3 HD_1377 UPF0265 protein HD_1377 Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q7VQX3 1.23e-40 133 71 0 100 3 Bfl460 UPF0265 protein Bfl460 Blochmanniella floridana
B3GXE4 1.8e-39 130 60 0 100 3 APP7_0751 UPF0265 protein APP7_0751 Actinobacillus pleuropneumoniae serotype 7 (strain AP76)
A3N073 2.01e-39 130 60 0 100 3 APL_0709 UPF0265 protein APL_0709 Actinobacillus pleuropneumoniae serotype 5b (strain L20)
B0BNZ0 2.01e-39 130 60 0 100 3 APJL_0708 UPF0265 protein APJL_0708 Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
P57621 2.54e-39 129 67 0 97 3 BU556 UPF0265 protein BU556 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
B8D879 2.54e-39 129 67 0 97 3 BUAPTUC7_550 UPF0265 protein BUAPTUC7_550 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)
B8D9X7 2.54e-39 129 67 0 97 3 BUAP5A_549 UPF0265 protein BUAP5A_549 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)
Q8K922 6.99e-39 128 63 0 97 3 BUsg_538 UPF0265 protein BUsg_538 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
A5UIT6 2.06e-38 127 62 0 99 3 CGSHiGG_09540 UPF0265 protein CGSHiGG_09540 Haemophilus influenzae (strain PittGG)
A5UCU0 2.06e-38 127 62 0 99 3 CGSHiEE_06200 UPF0265 protein CGSHiEE_06200 Haemophilus influenzae (strain PittEE)
P44117 2.06e-38 127 62 0 99 1 HI_1168 UPF0265 protein HI_1168 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q4QLC9 3.33e-38 127 62 0 99 3 NTHI1336 UPF0265 protein NTHI1336 Haemophilus influenzae (strain 86-028NP)
B8F426 4.25e-38 126 61 0 98 3 HAPS_0398 UPF0265 protein HAPS_0398 Glaesserella parasuis serovar 5 (strain SH0165)
Q9CMI8 4.6e-38 127 57 0 107 3 PM0836 UPF0265 protein PM0836 Pasteurella multocida (strain Pm70)
A6VMU2 2.09e-37 125 60 0 101 3 Asuc_0921 UPF0265 protein Asuc_0921 Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
A5EZT0 1.93e-35 120 63 0 93 3 VC0395_0679 UPF0265 protein VC0395_0679/VC395_A0572 Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q9KLK2 1.93e-35 120 63 0 93 3 VC_A0741 UPF0265 protein VC_A0741 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
C3LW07 1.93e-35 120 63 0 93 3 VCM66_A0700 UPF0265 protein VCM66_A0700 Vibrio cholerae serotype O1 (strain M66-2)
A1SY66 6.56e-35 118 65 0 93 3 Ping_2721 UPF0265 protein Ping_2721 Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37)
Q8RG97 3.3e-34 116 68 0 89 3 FN0411 UPF0265 protein FN0411 Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
B7VQW7 1.08e-33 115 57 0 95 3 VS_II0351 UPF0265 protein VS_II0351 Vibrio atlanticus (strain LGP32)
Q6LQR1 1.1e-33 115 62 0 93 3 PBPRA1961 UPF0265 protein PBPRA1961 Photobacterium profundum (strain SS9)
Q5DZX0 3.39e-33 114 53 0 93 3 VF_A0606 UPF0265 protein VF_A0606 Aliivibrio fischeri (strain ATCC 700601 / ES114)
B5ETZ6 3.39e-33 114 53 0 93 3 VFMJ11_A0615 UPF0265 protein VFMJ11_A0615 Aliivibrio fischeri (strain MJ11)
B6ERM4 1.25e-32 112 54 0 93 3 VSAL_II0603 UPF0265 protein VSAL_II0603 Aliivibrio salmonicida (strain LFI1238)
Q7MD09 3.17e-32 112 56 0 93 3 VVA1227 UPF0265 protein VVA1227 Vibrio vulnificus (strain YJ016)
Q8D5Z0 3.17e-32 112 56 0 93 3 VV2_0759 UPF0265 protein VV2_0759 Vibrio vulnificus (strain CMCP6)
Q87GT9 3.94e-32 111 55 0 95 3 VPA1226 UPF0265 protein VPA1226 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A7N3Z2 8.86e-32 110 54 0 95 3 VIBHAR_05346 UPF0265 protein VIBHAR_05346 Vibrio campbellii (strain ATCC BAA-1116)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04175
Feature type CDS
Gene tmaR
Product PTS system regulator TmaR
Location 940674 - 941012 (strand: 1)
Length 339 (nucleotides) / 112 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1969
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04363 Protein of unknown function (DUF496)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2926 Function unknown (S) S Uncharacterized conserved protein YeeX, DUF496 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09802 uncharacterized protein - -

Protein Sequence

MDNASKPSFQNVLEFVRMYRRKNKIRREITDNEKKIRDNQKRVLLLDNLSEYIKPGMSIEDVLGIIANMRSDYEDRVDDYIIKNADLSKERRELSKQLKAMGEIKNIPNIKN

Flanking regions ( +/- flanking 50bp)

ATCTTAAACAGTACTATTTTTCTTAAATATCAATTGTAAAGGTGTAGGAAATGGATAACGCAAGCAAGCCGTCTTTCCAAAACGTACTGGAGTTTGTGCGTATGTATCGTCGTAAAAACAAAATCCGTCGTGAGATCACTGACAATGAGAAAAAGATCCGTGATAACCAAAAACGTGTTCTTTTATTAGACAACTTAAGTGAATACATTAAGCCTGGTATGTCAATTGAAGATGTACTCGGTATTATCGCTAATATGCGTAGTGACTATGAAGATCGTGTAGATGATTACATCATAAAAAATGCAGATCTCTCTAAAGAGCGTCGTGAATTGTCAAAACAATTAAAAGCGATGGGTGAAATTAAAAATATTCCTAATATTAAAAATTAATTATATTAGCTGGCAAATCCAAAGGCCTCTGAATGGTTGTTCAGAGGCCT