Homologs in group_3120

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19995 FBDBKF_19995 53.1 Morganella morganii S1 - alpha/beta hydrolase
EHELCC_07620 EHELCC_07620 53.1 Morganella morganii S2 - alpha/beta hydrolase
NLDBIP_07945 NLDBIP_07945 53.1 Morganella morganii S4 - alpha/beta hydrolase
LHKJJB_06320 LHKJJB_06320 53.1 Morganella morganii S3 - alpha/beta hydrolase
HKOGLL_19175 HKOGLL_19175 53.1 Morganella morganii S5 - alpha/beta hydrolase

Distribution of the homologs in the orthogroup group_3120

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3120

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P96671 2.61e-35 125 37 1 180 1 ydeN Putative hydrolase YdeN Bacillus subtilis (strain 168)
O75884 1.44e-06 50 23 4 168 1 RBBP9 Serine hydrolase RBBP9 Homo sapiens
O88851 4.22e-05 45 22 5 184 1 Rbbp9 Putative hydrolase RBBP9 Mus musculus
O88350 0.000173 43 22 4 155 1 Rbbp9 Serine hydrolase RBBP9 Rattus norvegicus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03995
Feature type CDS
Gene -
Product alpha/beta hydrolase
Location 899635 - 900213 (strand: 1)
Length 579 (nucleotides) / 192 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3120
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF06821 Serine hydrolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3545 General function prediction only (R) R Predicted esterase of the alpha/beta hydrolase fold

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07002 serine hydrolase [EC:3.-.-.-] - -

Protein Sequence

MKGKRVVIVHGYTASPKDNWFPWLKEELGSLGYDVSIPMMPEPNHPNPNEWQQKLADENIILDKDTILVGHSLGCITLLRFLSEQACEDITIGGYILVAGFNSEQKTLPELNSHIYNNLNYSKLIKISDKRVSLISSNDWIVSPDSSKKLASQLQTQIVIEEDAGHFLDKEGYIKLPVMLDIFKYMLNQYKL

Flanking regions ( +/- flanking 50bp)

CAGGTATTAAACTTATTATTTTGATAATGTGTATCTATATAGGAGGATGAGTGAAAGGCAAAAGAGTTGTTATTGTTCATGGCTATACTGCATCTCCCAAGGATAATTGGTTTCCATGGTTGAAAGAAGAGCTTGGATCATTAGGATATGATGTCAGTATACCTATGATGCCTGAGCCTAATCATCCTAACCCTAATGAGTGGCAACAAAAACTTGCCGATGAAAACATAATACTTGATAAAGATACTATTCTTGTTGGGCATAGTCTGGGATGTATAACTTTATTACGTTTTCTTTCTGAACAGGCTTGTGAAGATATAACAATAGGCGGGTATATTTTAGTCGCTGGTTTTAATAGTGAACAAAAAACTTTACCTGAGTTGAACTCTCATATTTATAATAACCTGAATTATAGTAAGTTAATTAAAATATCGGATAAAAGGGTATCATTAATATCATCCAATGATTGGATTGTGAGTCCTGATTCATCCAAAAAATTAGCTAGTCAATTACAAACTCAAATTGTTATTGAAGAAGATGCGGGACATTTTCTTGATAAAGAAGGCTATATTAAATTGCCAGTCATGCTTGATATTTTTAAATATATGCTGAATCAATATAAGCTATAAATACAATATCAGAATATTCGTCAATTGGTTTTTATCAGTCATTTAAATAA