Homologs in group_2709

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06730 FBDBKF_06730 72.3 Morganella morganii S1 ppnN Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family
EHELCC_04240 EHELCC_04240 72.3 Morganella morganii S2 ppnN Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family
NLDBIP_04240 NLDBIP_04240 72.3 Morganella morganii S4 ppnN Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family
LHKJJB_10070 LHKJJB_10070 72.3 Morganella morganii S3 ppnN Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family
HKOGLL_08905 HKOGLL_08905 72.3 Morganella morganii S5 ppnN Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family

Distribution of the homologs in the orthogroup group_2709

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2709

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P48636 1.07e-69 213 51 1 184 1 PA4923 Cytokinin riboside 5'-monophosphate phosphoribohydrolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B9F166 4.13e-60 190 48 0 181 3 LOGL2 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 Oryza sativa subsp. japonica
Q0JBP5 1.09e-58 187 46 0 181 2 LOGL6 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 Oryza sativa subsp. japonica
Q8RUN2 9.45e-58 183 47 0 182 1 LOG1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 Arabidopsis thaliana
O06986 1.2e-56 180 43 0 182 1 yvdD LOG family protein YvdD Bacillus subtilis (strain 168)
Q8GW29 4.89e-56 179 46 0 181 1 LOG7 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 Arabidopsis thaliana
B7E7M8 4.99e-56 179 43 0 182 2 LOGL9 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL9 Oryza sativa subsp. japonica
Q0DFG8 6.77e-56 180 46 0 179 2 LOGL8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL8 Oryza sativa subsp. japonica
Q5BPS0 6.91e-56 179 46 0 182 1 LOG2 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 Arabidopsis thaliana
Q7XDB8 5.69e-55 176 45 0 182 2 LOGL10 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 Oryza sativa subsp. japonica
Q5ZC82 9.62e-55 177 45 0 182 1 LOG Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Oryza sativa subsp. japonica
Q8L8B8 3.94e-54 174 44 1 185 1 LOG3 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 Arabidopsis thaliana
Q8H7U8 1.02e-53 173 44 0 182 2 LOGL3 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 Oryza sativa subsp. japonica
Q9LFH3 1.38e-53 173 45 0 181 1 LOG4 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 Arabidopsis thaliana
Q8LR50 1.49e-53 173 44 0 181 2 LOGL1 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1 Oryza sativa subsp. japonica
Q9LYV8 2.92e-53 171 46 0 182 3 LOG6 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG6 Arabidopsis thaliana
Q5TKP8 7.95e-53 171 42 0 181 2 LOGL7 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL7 Oryza sativa subsp. japonica
Q8LBB7 1.41e-52 171 42 0 181 1 LOG5 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 Arabidopsis thaliana
P46378 5.25e-50 163 49 1 165 2 fas6 Cytokinin riboside 5'-monophosphate phosphoribohydrolase Rhodococcus fascians
Q84MC2 9.6e-49 160 41 1 185 1 LOG8 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 Arabidopsis thaliana
Q84M85 5.18e-46 154 42 0 184 2 LOGL5 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL5 Oryza sativa subsp. japonica
Q851C7 8.93e-44 148 42 0 176 3 LOGL4 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 Oryza sativa subsp. japonica
P47044 1.37e-40 140 37 3 207 1 YJL055W LOG family protein YJL055W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O05306 1.11e-24 98 34 2 156 1 log Cytokinin riboside 5'-monophosphate phosphoribohydrolase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
B2HS63 1.84e-22 92 31 2 180 1 MMAR_4233 Cytokinin riboside 5'-monophosphate phosphoribohydrolase Mycobacterium marinum (strain ATCC BAA-535 / M)
K3VH30 4.11e-22 95 34 5 174 1 FCK1 Bifunctional cytokinin biosynthesis protein Fusarium pseudograminearum (strain CS3096)
Q9XH06 1.78e-18 80 36 2 114 3 LOG9 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG9 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03120
Feature type CDS
Gene -
Product TIGR00730 family Rossman fold protein
Location 688629 - 689207 (strand: 1)
Length 579 (nucleotides) / 192 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2709
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF03641 Possible lysine decarboxylase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1611 Nucleotide transport and metabolism (F) F Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22522 cytokinin riboside 5'-monophosphate phosphoribohydrolase [EC:3.2.2.-] - -

Protein Sequence

MNKIKSIAVYCGSSLGASPIYKQQAILFAKELVKRNITLVYGGASVGIMGTLADTVLQEGGKVIGVIPTLLEGREISHKNLTELHVVETMHQRKSKMIELADGFVALPGGFGTLEEFSEVFTWSQIGLHQKPLGIFNINDFYQPLLAMIDKMVDEKFLHEKYRHMAIVEQSPIQLLDKFESYIAPSIKTYDK

Flanking regions ( +/- flanking 50bp)

GGGTTCAGTATAATTTTTCACTCGTTTTAACTAGCTAAAGAGAATTAAAAATGAATAAAATAAAGTCTATTGCCGTGTATTGTGGTTCAAGTTTAGGCGCTTCACCAATTTATAAACAACAAGCGATTCTTTTTGCTAAAGAGCTGGTTAAACGTAATATCACTTTAGTTTATGGTGGTGCCAGTGTAGGAATTATGGGCACGCTCGCGGATACCGTTTTACAGGAAGGGGGTAAAGTTATTGGTGTGATCCCAACGCTATTAGAAGGGCGTGAAATCTCACATAAAAATCTGACAGAACTCCATGTCGTTGAAACTATGCACCAACGTAAAAGTAAAATGATTGAACTCGCGGACGGCTTTGTGGCACTGCCGGGGGGTTTTGGCACATTAGAAGAGTTCAGTGAAGTGTTTACTTGGAGCCAAATAGGCCTTCATCAAAAGCCATTAGGTATATTTAATATTAATGATTTTTATCAGCCATTACTGGCTATGATAGATAAAATGGTAGATGAAAAATTCTTACATGAAAAATATCGTCATATGGCGATTGTTGAGCAATCACCTATCCAGTTATTAGATAAATTTGAAAGTTATATTGCCCCTTCGATTAAAACCTACGATAAATAAAGGTAGAGCATGATAACCATAAGAAAAGCTGTACTTTCTGATGTTGAGCA