Homologs in group_4355

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4355

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4355

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02740
Feature type CDS
Gene -
Product SWIM zinc finger family protein
Location 595143 - 597218 (strand: -1)
Length 2076 (nucleotides) / 691 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4355
Orthogroup size 1
N. genomes 1

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4715 Function unknown (S) S Uncharacterized protein, contains SWIM-type Zn finger domain

Protein Sequence

MSWQTVYFHYDEDALTVFANAGLLRRARKDVDNEKVSVTDANTGQFSSDGQKVVLHEAGIQQASCDCSAAGCCKHILAAILWLQANNNSTDDINTDNPIETSAEKIIAPVETPPLLPSLFTLDPELLIKKAGKPACRTAINLIEQWEDKTLVLEDTGTQLKIQLPDVDEPVIFLQASGYDGMLSPFSSSQKKAFHLAIVAKIFKQNTQPWTWPEDLIPLKSSQRPLNDEEIALINTIEQFIDDLLRQGLSHISLSSATQLHLLNMSARAEGLPRLASYLRTLSTQVKRLAERHFTMDESNVLRLLAHISAYLFQLSYATPEQLKTLRGQLRRQYDDKKTSLALIPIDAHWWTAQSGALGTTFTFWDKETKQFLQATQARPNQLDTLFNRYSVWHSLSLWKQTADKLMRRPFLLQAPRISDEGKLATIGDSFAQNQTDFLDVTDYHQLQTELGIHNWQDLPNYFTDQPEGFLSPLVLHIKSYNPLIWHEVEQCVIWEVVDNNGNSAFLRLYWEGETQNNLEELRFLTKRELEIVAITVQPVRRDFNIDLLPTTIWIKTEQGIEMFYLDFDQFPRKKKQSGFISHIQEYMAKRKRQTAMHHSEPTLAQKFCRPILSVLEAQACTGREQLSAMQKEQLERSKQIADDLGMTLIANQLTRYLALTARDSQALLQLIWLCDNLQQLQSPLPIQLNE

Flanking regions ( +/- flanking 50bp)

GCAGCTTTAACCCCAGAACATTTCGCACAGTGGCTAGCAGAGGTAATGCAATGAGTTGGCAGACCGTTTATTTTCATTATGATGAAGATGCGCTTACCGTCTTTGCTAATGCCGGATTATTAAGACGCGCAAGAAAAGATGTTGATAACGAAAAAGTCTCTGTTACTGATGCAAATACAGGGCAATTTAGCAGTGATGGGCAAAAAGTCGTTTTACATGAAGCAGGCATTCAGCAAGCCAGTTGTGATTGTTCCGCAGCAGGTTGTTGCAAACATATTTTAGCCGCTATTTTATGGTTACAAGCCAACAACAATTCGACTGATGATATTAATACTGATAATCCCATTGAAACATCAGCAGAAAAAATTATAGCGCCTGTTGAAACACCGCCTTTATTACCCTCTTTATTTACGCTTGATCCCGAGTTACTCATCAAAAAAGCAGGTAAACCCGCCTGTCGGACTGCGATTAACTTAATTGAACAATGGGAAGATAAAACTTTAGTTCTAGAAGACACAGGAACCCAGCTAAAAATCCAACTCCCTGATGTTGATGAACCGGTCATTTTCTTACAAGCAAGTGGTTACGATGGCATGTTATCCCCTTTTTCTAGCTCTCAGAAAAAAGCTTTTCATCTTGCGATTGTCGCGAAAATATTTAAGCAAAATACACAGCCTTGGACGTGGCCTGAAGATTTAATTCCCTTAAAATCTTCACAACGCCCACTGAATGATGAAGAAATTGCCCTTATTAATACTATTGAACAATTTATTGATGATCTATTACGTCAAGGGCTATCACACATTAGTTTAAGTAGCGCAACGCAATTACATTTACTTAATATGTCTGCTCGTGCCGAGGGTTTACCTCGTTTAGCCTCTTATTTACGAACATTAAGTACTCAAGTCAAGCGGTTAGCTGAAAGACATTTCACTATGGATGAAAGCAATGTCTTACGTCTATTAGCTCATATCTCAGCCTATCTTTTCCAGCTATCTTATGCGACACCTGAACAATTAAAAACATTACGAGGGCAACTTCGCCGTCAATATGATGATAAAAAAACCAGTCTCGCGCTTATTCCTATTGATGCACATTGGTGGACAGCACAAAGTGGCGCATTAGGCACAACTTTTACTTTCTGGGATAAAGAAACAAAACAATTTTTACAAGCGACACAAGCTCGCCCTAATCAACTTGATACCCTATTTAATCGCTATAGTGTTTGGCATAGTTTATCGTTATGGAAACAAACTGCAGATAAGCTCATGCGCCGACCTTTCTTATTACAAGCGCCTCGTATTTCTGATGAAGGGAAACTAGCTACTATTGGCGATAGCTTTGCGCAAAATCAAACCGATTTTCTTGATGTCACAGATTATCATCAACTACAAACAGAATTAGGTATTCATAACTGGCAAGATTTACCCAATTATTTTACGGATCAACCAGAAGGATTTCTTTCCCCTCTGGTTTTACATATCAAAAGCTATAATCCCTTAATTTGGCATGAAGTAGAGCAGTGTGTTATTTGGGAAGTGGTAGATAATAATGGAAATTCGGCCTTTTTGCGCCTTTATTGGGAAGGCGAAACGCAAAATAATTTAGAAGAATTACGTTTTCTCACTAAACGAGAATTAGAAATCGTTGCGATCACCGTGCAACCTGTTCGACGTGATTTCAATATCGATTTATTACCCACCACCATTTGGATCAAAACAGAGCAAGGCATTGAAATGTTTTATCTCGATTTTGACCAATTTCCACGTAAGAAAAAACAGTCTGGTTTTATTAGTCATATTCAAGAATATATGGCTAAACGTAAGCGACAAACGGCAATGCATCACAGCGAACCTACCCTTGCACAAAAATTTTGTCGCCCCATTTTATCCGTATTGGAAGCCCAAGCATGTACAGGGCGAGAACAACTTTCTGCAATGCAAAAAGAGCAATTAGAGAGAAGCAAACAAATTGCTGACGATTTAGGTATGACATTAATAGCTAACCAATTAACTCGTTATCTCGCTTTAACTGCTCGTGACTCTCAAGCTTTATTACAGTTAATTTGGCTATGTGATAATCTGCAACAATTACAAAGCCCGTTACCCATTCAACTTAATGAATAAATTTCAAGGTTGTTGTTAAATAAAAAGCTATCTCACTTAGTTAATAAGAG