Homologs in group_3882

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS04570 PMI_RS04570 23.9 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_3882

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3882

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02515
Feature type CDS
Gene -
Product phage tail protein
Location 555076 - 555732 (strand: 1)
Length 657 (nucleotides) / 218 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3882
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF08813 Phage tail tube protein, TTP

Protein Sequence

MAYNIPNGSRVYVASKYDDEIKITEATNAEEAVLTVDDVGDIAKGDIVHVTSGWKKASGAFRVASVAESKITLEGVDTSDKNVFPAGGGTGTLKKVLSWEVMPQVMTLSTEGGEQQTQEVQFLEDEQAETIDTYKNGVVQVYTFAHDAKLPIRKLLTKLDDSKQVTAIRFFNKRAEEDRYYTASISFQRVPNTAINEVENVTARFSLKSEMQIYTNAS

Flanking regions ( +/- flanking 50bp)

GATAACACCGCTTAATTGCGGTTTTTTTATACCTAAAATAGAGGTTAACAATGGCCTATAACATTCCTAATGGGTCGCGTGTTTACGTCGCAAGTAAATACGATGACGAAATTAAAATTACCGAGGCAACTAATGCCGAAGAAGCCGTACTAACAGTTGATGATGTGGGTGACATTGCTAAAGGCGATATTGTTCATGTTACATCTGGCTGGAAAAAAGCTTCGGGTGCTTTCCGTGTTGCAAGTGTCGCTGAATCTAAAATCACCTTAGAAGGTGTCGATACAAGTGATAAAAATGTGTTTCCTGCTGGTGGCGGTACAGGAACATTAAAGAAAGTATTGTCATGGGAAGTCATGCCACAGGTAATGACACTTTCTACAGAAGGTGGGGAACAGCAAACTCAAGAGGTTCAATTTCTTGAAGATGAGCAGGCAGAAACTATCGATACCTATAAAAATGGTGTTGTACAGGTTTATACCTTTGCTCACGATGCTAAGCTGCCTATCCGTAAATTGCTAACAAAATTGGACGACAGTAAGCAAGTTACTGCAATCCGATTCTTCAATAAACGCGCAGAAGAAGATCGCTATTACACAGCTTCAATTTCATTCCAGCGTGTGCCAAACACTGCTATCAACGAAGTTGAAAACGTAACAGCGCGATTCTCACTTAAATCTGAAATGCAGATTTATACCAACGCATCTTAATCAATAAATACTCACAACAGCCCCGAGTCAGGGGCTTTTTAAGGACTAAT