Homologs in group_4331

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4331

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4331

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAA1 2.23e-31 115 35 3 198 1 yagU Inner membrane protein YagU Escherichia coli (strain K12)
P0AAA2 2.23e-31 115 35 3 198 3 yagU Inner membrane protein YagU Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02425
Feature type CDS
Gene -
Product DUF1440 domain-containing protein
Location 542647 - 543168 (strand: 1)
Length 522 (nucleotides) / 173 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4331
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF07274 Protein of unknown function (DUF1440)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3477 Function unknown (S) S Uncharacterized membrane protein YagU, involved in acid resistance, DUF1440 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08996 putative membrane protein - -

Protein Sequence

MIDLFKLTKKSSRHIGIAIYVGIIAGIFSALVKSGFEDLIPPRTLETTPPPVVLLEKLGLNIDTMTYHWMGYSINWGGNGVHILFSIVIAVTYCVIAEFLPKVKLLHGICFGIGVSVFAHGLVVPLLGLSGWLWTAGYQALISEFVGTAFWIWSIEAIRQNLRYCLTKENDAE

Flanking regions ( +/- flanking 50bp)

CTTATCTCTACTATACTCATAATATTCAATTTATAGAGCGAGTATATATAATGATTGATTTGTTTAAGTTAACGAAAAAAAGTTCTAGGCATATTGGTATAGCAATATATGTTGGTATTATAGCGGGTATCTTTTCAGCTTTAGTTAAATCTGGTTTTGAAGACCTAATTCCCCCGAGAACACTTGAAACGACACCCCCGCCAGTCGTCTTACTCGAAAAGCTTGGATTAAATATAGATACTATGACTTATCATTGGATGGGATATAGTATTAATTGGGGCGGTAATGGTGTTCATATATTATTCTCAATAGTTATCGCTGTGACATATTGTGTTATTGCTGAATTCTTGCCAAAGGTTAAATTATTACACGGTATTTGTTTTGGTATTGGCGTTTCTGTTTTTGCTCATGGTTTAGTCGTACCTCTACTAGGATTGTCTGGCTGGCTTTGGACAGCAGGTTATCAAGCATTAATTTCTGAGTTTGTTGGAACCGCTTTTTGGATCTGGTCAATTGAAGCGATTAGACAAAATTTGCGTTATTGTTTAACTAAAGAAAATGATGCTGAGTAGATAAGGAAGTTCAACCTTAATCTGTTATAAATTTCTTAAAGATCGCTTAG