Homologs in group_4321

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4321

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4321

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P33228 2.24e-139 395 70 0 257 1 recT Protein RecT Escherichia coli (strain K12)
P45908 4.28e-12 68 29 5 186 4 yqaK Uncharacterized protein YqaK Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02325
Feature type CDS
Gene recT
Product recombination protein RecT
Location 531420 - 532226 (strand: -1)
Length 807 (nucleotides) / 268 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4321
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF03837 RecT family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3723 Replication, recombination and repair (L) L Recombinational DNA repair protein RecT

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07455 recombination protein RecT - -

Protein Sequence

MSNPPLAQADLQKTQGTKVKEKTKDQLLVECINKPSMKAQLAAALPRHMTPDRMIRIVSTEIRKTPELANCDMQSFIGAVVQCSQLGLEPGNALGHAYLLPFGNGKSKSGQSNVQLIIGYRGMIDLARRSNQIISISARTVRQGDSFHFEYGLNENLTHVPGENEDSPITHVYAVARLKDGGVQFEVMTHNQIEKVRASSKAGQNGPWVSHWEEMAKKTVIRRLFKYLPVSIEMQKAVILDEKAEANVDQENATIFEGEYEEVGTDGK

Flanking regions ( +/- flanking 50bp)

GGCAGGCATACGCACATTATCACTGCCCTACTGGGCTAAGGAATTAAGGGATGAGTAACCCACCATTAGCTCAAGCTGACTTGCAAAAAACACAAGGTACAAAGGTAAAAGAAAAAACCAAAGATCAGTTGTTGGTTGAGTGTATCAATAAACCAAGTATGAAAGCTCAGCTAGCAGCCGCCCTTCCTCGTCATATGACGCCGGATAGAATGATCCGAATAGTGTCAACGGAAATCAGAAAAACACCAGAATTAGCCAACTGTGATATGCAAAGTTTTATCGGAGCTGTTGTGCAGTGTTCACAATTGGGATTGGAGCCGGGTAACGCACTTGGTCATGCATACCTGCTCCCGTTTGGAAATGGAAAATCCAAGTCAGGACAATCAAATGTGCAGTTAATTATTGGTTATCGAGGAATGATTGATCTAGCCCGTCGCTCAAATCAAATAATCAGCATTTCAGCCAGAACGGTAAGGCAAGGCGATAGTTTCCACTTTGAGTATGGACTGAATGAAAACTTAACGCACGTGCCGGGTGAAAATGAGGACTCACCAATTACACACGTTTACGCTGTCGCAAGGCTGAAAGATGGCGGTGTCCAGTTTGAAGTTATGACGCATAACCAAATTGAGAAAGTCAGAGCATCAAGTAAGGCTGGTCAAAATGGGCCTTGGGTCTCTCACTGGGAAGAAATGGCGAAGAAAACCGTTATCCGTCGCTTATTTAAATATCTGCCAGTCTCTATCGAAATGCAGAAAGCGGTCATTTTAGACGAAAAAGCAGAGGCTAATGTAGACCAAGAGAATGCAACTATTTTTGAAGGAGAATATGAGGAGGTAGGTACTGATGGCAAGTAAAGGCGTGAATAAATGTATTCTCATCGGTCACTTGGGGCAAGACCCTGAAA