Homologs in group_4317

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4317

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4317

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A9N5C6 4.67e-06 51 30 6 148 3 sseL Deubiquitinase SseL Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8ZNG2 9.66e-06 50 30 6 148 1 sseL Deubiquitinase SseL Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PI48 1.11e-05 50 31 6 148 3 sseL Deubiquitinase SseL Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z550 1.17e-05 50 29 6 152 3 sseL Deubiquitinase SseL Salmonella typhi
A9MJD1 6.75e-05 47 30 5 133 3 sseL Deubiquitinase SseL Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q57M66 7.79e-05 47 28 6 148 3 sseL Deubiquitinase SseL Salmonella choleraesuis (strain SC-B67)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01970
Feature type CDS
Gene -
Product hypothetical protein
Location 464257 - 465315 (strand: 1)
Length 1059 (nucleotides) / 352 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4317
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF22102 ElaD/SseL-like C-terminal

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18015 deubiquitinase [EC:3.4.22.-] Salmonella infection -

Protein Sequence

MKVTQILFCNNENSITDNEIKNLFNIFDTQVINNSRVDVNLETAKNQINKLANAVRNGSSKDLDYLVNIMFHDDIKISLYATNQLYLIYPKLNNSIREDIKELVKLLYEIKIKEDQEYFKERPLLSAMACEEAIARQKGKGENVFISAVDNYLNIKCNDSVLANSNESVSNNNRYISSSELESWASFQPYQCDIGSYESILKKIENSKGSAELKNYVVLVNNNHWVALLTYKDSCFLCDSLPSSKKDERHNLLIELEKKGFNTINIEYNLQENVPNGCGLLALNYIDSLHNEWNKFNHEKEDDLISTIETVLQKTGKDFLNLSCGEQTTFNHDVRKKLIMDTLFCIVKSNDE

Flanking regions ( +/- flanking 50bp)

TTTACCGTATAGTGGTAGGATTATTATTATTTAATAAATTTTGGTGACTTATGAAGGTAACACAAATCCTTTTTTGTAATAATGAAAATAGTATTACAGATAATGAAATAAAAAACCTATTTAATATCTTTGATACTCAGGTCATTAATAATAGTAGAGTGGATGTTAATCTTGAGACTGCCAAAAATCAAATAAATAAACTCGCTAATGCAGTTAGGAATGGAAGCTCAAAAGATTTGGATTATTTAGTAAATATCATGTTTCATGATGATATAAAAATAAGCTTATATGCAACTAATCAGCTCTACTTGATTTATCCAAAATTAAATAACTCGATAAGAGAAGATATTAAAGAATTAGTCAAATTACTCTATGAAATAAAAATAAAAGAGGATCAAGAGTATTTTAAAGAACGACCTTTATTAAGTGCAATGGCTTGTGAGGAAGCGATTGCTAGACAAAAGGGAAAAGGGGAGAATGTTTTTATCTCAGCGGTTGATAATTATTTAAATATAAAATGTAATGATAGCGTATTGGCCAATAGTAATGAAAGCGTAAGTAATAATAATCGATATATATCTTCATCTGAATTAGAGTCTTGGGCGTCATTTCAACCCTATCAGTGTGATATTGGTTCCTATGAATCAATACTTAAAAAAATAGAAAATAGCAAAGGATCCGCGGAGTTAAAAAATTATGTGGTTTTAGTCAATAATAACCATTGGGTTGCGTTATTGACTTATAAAGATAGCTGTTTTTTATGTGATTCATTGCCCTCAAGCAAAAAAGATGAACGTCATAACTTATTAATTGAACTAGAAAAAAAAGGATTTAATACTATCAATATAGAATATAATCTACAAGAAAATGTACCTAATGGATGTGGTCTTTTGGCGCTTAATTATATTGATAGTTTACATAATGAATGGAATAAATTTAATCATGAAAAAGAAGATGATTTAATATCCACAATAGAAACAGTATTACAAAAAACAGGAAAAGACTTTCTAAACCTAAGTTGTGGTGAGCAAACCACATTTAATCATGATGTTAGGAAAAAATTGATTATGGATACACTTTTTTGTATTGTTAAATCTAATGATGAATAGCTCCATTAGTTATTGATATAAAAGCTATTTTTTATTAATAAAAAGCTAAA