Homologs in group_2024

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15185 FBDBKF_15185 79.6 Morganella morganii S1 pepD Di- or tripeptidase
EHELCC_11060 EHELCC_11060 79.6 Morganella morganii S2 pepD Di- or tripeptidase
NLDBIP_11405 NLDBIP_11405 79.6 Morganella morganii S4 pepD Di- or tripeptidase
LHKJJB_11265 LHKJJB_11265 79.6 Morganella morganii S3 pepD Di- or tripeptidase
HKOGLL_09875 HKOGLL_09875 79.6 Morganella morganii S5 pepD Di- or tripeptidase
F4V73_RS12260 F4V73_RS12260 78.1 Morganella psychrotolerans pepD beta-Ala-His dipeptidase

Distribution of the homologs in the orthogroup group_2024

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2024

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15288 0.0 743 74 0 485 1 pepD Cytosol non-specific dipeptidase Escherichia coli (strain K12)
P44817 0.0 543 55 3 486 3 pepD Cytosol non-specific dipeptidase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P54542 1.87e-10 66 23 11 298 3 yqjE Uncharacterized protein YqjE Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01745
Feature type CDS
Gene -
Product aminoacyl-histidine dipeptidase
Location 414121 - 415578 (strand: -1)
Length 1458 (nucleotides) / 485 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2024
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01546 Peptidase family M20/M25/M40
PF07687 Peptidase dimerisation domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2195 Amino acid transport and metabolism (E) E Di- or tripeptidase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01270 dipeptidase D [EC:3.4.13.-] Glutathione metabolism
Metabolic pathways		 -

Protein Sequence

MSELSTLSPQPLWDIFAKICSIPHPSYHEEALASHIMAWATEKGLSVERDAVGNILIRKPATKGMEDRKTVVLQAHLDMVPQKNNDTEHDFTKDPIQPYIDGEWVKAKGTTLGADNGVGMASALAVLADDTVKHGPLEVLLTMTEETGMDGAFGLQPGWLQADILINTDSEEEGEIYMGCAGGIDVKTTVDLTYEAIPANHIVKKLVLKGLNGGHSGGDIHLGLGNANKLLARFLAEHADELALKLIDFHGGTLRNAIPREAHIIFAIPADKATQLNSITTEFEALLKSELAIAEKNLAIELTDTSTEKPVFTADCQSRTINLLNAMPNGVIRMSDDVEGVVETSLNVGVVSIVDDKVEILCLIRSLIDSGKTYVVSMLTALAKLAQADIETKGGYPGWKPDADSPVMHLVRDTYQQLFDKVPNIMVIHAGLECGLFKKPYPDMDMVSIGPTIRGAHSPDERVHIKSVGQYWQLLTAILKAIPAK

Flanking regions ( +/- flanking 50bp)

AGAAAGCGGTAGGCTATTCATAACACAGATGCTGTTAGAGGAGATCCATCGTGTCTGAACTATCTACTCTATCCCCACAACCATTATGGGATATTTTTGCAAAAATTTGTTCAATTCCACACCCTTCATACCATGAAGAAGCCTTAGCGTCCCACATTATGGCTTGGGCGACAGAAAAAGGTTTATCTGTTGAGCGCGATGCGGTAGGAAATATTTTAATCCGTAAACCTGCCACCAAAGGTATGGAAGATCGTAAAACAGTCGTTTTACAAGCGCACTTAGATATGGTGCCACAAAAAAATAACGATACCGAACACGACTTTACCAAAGATCCTATCCAACCTTATATTGATGGTGAATGGGTAAAAGCGAAAGGCACCACATTAGGTGCAGATAATGGTGTTGGTATGGCTTCTGCACTCGCTGTATTAGCTGACGATACTGTTAAACATGGCCCCTTAGAAGTATTGTTAACCATGACAGAAGAAACTGGAATGGATGGTGCTTTTGGACTACAGCCTGGTTGGTTACAAGCAGATATTCTGATTAATACAGACTCAGAAGAAGAAGGCGAAATCTATATGGGTTGTGCCGGTGGTATTGATGTTAAAACCACGGTAGACCTCACTTATGAAGCTATTCCTGCAAACCATATCGTCAAAAAACTGGTACTAAAAGGCCTAAATGGCGGCCACTCAGGTGGTGATATTCATTTAGGTTTAGGTAATGCAAACAAATTATTAGCGCGTTTCCTTGCTGAACATGCGGATGAATTAGCACTAAAATTAATTGATTTCCATGGTGGTACACTGCGTAATGCTATCCCTCGTGAAGCGCATATTATTTTTGCTATTCCTGCGGATAAAGCGACTCAATTAAATAGCATTACCACAGAATTTGAAGCGCTATTAAAAAGTGAATTAGCCATTGCTGAAAAAAATCTAGCTATCGAATTAACAGATACTAGCACCGAAAAACCAGTATTTACTGCTGATTGTCAATCTCGCACTATCAATTTACTTAATGCCATGCCAAATGGTGTTATTCGCATGAGTGATGATGTGGAAGGTGTGGTTGAAACCTCATTAAACGTCGGTGTAGTGAGTATTGTTGACGATAAAGTAGAAATCCTATGTTTAATTCGCTCTCTGATTGATAGCGGTAAAACTTATGTTGTTAGCATGCTGACAGCATTAGCCAAACTTGCTCAAGCAGATATCGAAACCAAAGGTGGTTATCCTGGCTGGAAACCTGATGCGGATTCACCGGTTATGCACTTAGTACGCGACACTTATCAACAACTATTTGATAAAGTGCCAAATATTATGGTGATCCATGCAGGTCTTGAGTGCGGTCTATTTAAAAAACCTTATCCAGATATGGATATGGTCTCTATTGGGCCAACTATTCGCGGTGCACACTCACCGGATGAGCGAGTACACATTAAGAGTGTAGGCCAATACTGGCAGTTACTGACAGCTATTTTAAAAGCGATCCCGGCTAAATAATTCTACTTAAAAACAGTTATCAAACCCGCTTAATAGGCGGGTTTTTTGTT